Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01538 ATGGAGAAGATTTCACTAACAACAACTGCTCATAACTGTTTCTTCACTTCTACACTTCCAAAGACATCTTCTTTCTCTTCTTCTCTATTCGCCTCTAACCAGCTTCTTGGTCTTCCCTTATCTTCTTCTTCTTCTTCTTCTGCGTCCACCAATCCCCGCCTCAGACTTGTTTCTAGAAACGCCGCTTCTTGCAGAACCGTCAAATGCTCTGTTTCTGAAGCCGCTGAACCCCTAACTGCTTCAGAGAGGAGGCAATTGAAGAGAAGAGGGGATGTAAGGAACATAGCAATTGTTGCTCATGTTGATCATGGAAAAACAACTCTAGTTGATGCCATGTTGAAACAGACAAAGGTGTTTCGTGATAATCAATTTGTGCAGGAAAGGATAATGGACTCAAATGATTTGGAGCGTGAGAGAGGAATCACAATATTGAGTAAAAATACATCGGTCTCCTATCATGACACAAAGATTAATATAATAGATACTCCTGGTCACTCTGATTTTGGAGGTGAAGTAGAGCGTATCCTGAACATGGTGGAAGGAATCCTTCTAGTGGTAGATTCTGTTGAAGGACCAATGCCACAGACAAGATTTGTCTTAAAGAAAGCATTAGAGTTTGGTCATTCAGTTGTTGTGGTTGTTAATAAGATAGACAGGCCATCTGCTCGCCCAGATTTTGTTGTCAATTCAACTTTTGAACTCTTCATTGAATTAAATGCAACAGATGAGCAGTGCGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGACAAGCAGGGTTGTCTCCTGAGAATCTGGCAGAAGACCTTGGGCCATTGTTTGAGTCCATCATCAGATGCATCCCAGGACCAAGGATTGATAAAGATGGTGCTCTTCAAATGCTTGTCACAAATATTGAGTATGATGAACACAAAGGGCGTATAGCAATTGGGCGCTTGCAAGCTGGAGTTTTGGAAAAAGGCATGGATGTCAAGGTATGCACATCAGAAGATTCATGTAGATATGGAAGAGTTAGTGAGCTTTACGTGTATGATAAATTCAGTAGGGTCCCTGCAGAAAGTGTGGAGGCTGGTGATATATGTGCAGTATGCGGAATTAGTGATATTCAGATTGGAGAGACAATTGCTTGTAAAGTGTCTGGAAAGCCACTACCTTCCATAAAGGTGGAGGAACCAACCGTGAAAATGGCTTTCTCCATAAACACTTCCCCTTTTGTTGGCCGCGAGGGAAAGTATGTTACGAGTAGGAACTTAAGGGACAGGCTTTATCGTGAACTTGAGCGAAACCTCGCCATGAAAGTTGAAGATGGTGAGACAGCAGATACATTCATTGTCAGTGGGCGTGGAACTTTGCATATCACCATACTGATTGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGCCCTCCTAAAGTTATCAACAAGAAAGTTAACGACAAATTGCTAGAACCATATGAGATTGCAACTGTTGAGGTACCTGAAGAACATATGGGAGCTGTTGTTGAACTCCTTGGGAAGAGACGAGGGCAGATGTTTGATATGGAAGGAGTTGGATCGGAGGGAACTACATTACTCAAATACAAGATCCCAACTCGTGGCCTCCTTGGATTACGGAATGCAATTTTAACTGCTTCCCGAGGGACAGCTATTCTCAATACTATCTTTGATAGCTATGGACCCTGGGCTGGTGACATGAGTACCCGGGATCAAGGCTCACTGGTTGCTTTTGAGGATGGAACAAGTTCTTCTTATGCAATCGCTAGTTCACAGGAAAGGGGACAGATGTTTATCGGTCCTGGAGTGGATGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCATTGAATGTTTGCAAGAAAAAAGCTGCAACAAACATACGCTCCAACAAGGAACAAACAGTGATTCTTGATACACCCTTGGATTATAGTCTTGATGACTGCATCGAGTACATACAAGAAGATGAACTAGTAGAGGTTACTCCCCAAAGTATTCGAATGTGCAAGAATCCAAAGCTTCAGAAGAAAACAAGGTAG 2055 0.4229 MEKISLTTTAHNCFFTSTLPKTSSFSSSLFASNQLLGLPLSSSSSSSASTNPRLRLVSRNAASCRTVKCSVSEAAEPLTASERRQLKRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVSYHDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRLQAGVLEKGMDVKVCTSEDSCRYGRVSELYVYDKFSRVPAESVEAGDICAVCGISDIQIGETIACKVSGKPLPSIKVEEPTVKMAFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNDKLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDMSTRDQGSLVAFEDGTSSSYAIASSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLQKKTR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01538 684 PRINTS GTP-binding elongation factor signature 94 107 IPR000795 GO:0003924|GO:0005525
Adu02g01538 684 PRINTS GTP-binding elongation factor signature 138 146 IPR000795 GO:0003924|GO:0005525
Adu02g01538 684 PRINTS GTP-binding elongation factor signature 158 168 IPR000795 GO:0003924|GO:0005525
Adu02g01538 684 PRINTS GTP-binding elongation factor signature 210 219 IPR000795 GO:0003924|GO:0005525
Adu02g01538 684 SMART EFG_C_a 482 571 IPR000640 -
Adu02g01538 684 TIGRFAM small_GTP: small GTP-binding protein domain 93 241 IPR005225 GO:0005525
Adu02g01538 684 SUPERFAMILY EF-G C-terminal domain-like 390 474 IPR035647 -
Adu02g01538 684 Gene3D - 90 285 IPR027417 -
Adu02g01538 684 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 92 681 IPR006298 GO:0005525
Adu02g01538 684 Gene3D - 476 569 - -
Adu02g01538 684 Gene3D bipa protein 570 677 IPR042116 -
Adu02g01538 684 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 90 285 IPR000795 GO:0003924|GO:0005525
Adu02g01538 684 Pfam Elongation factor Tu GTP binding domain 92 282 IPR000795 GO:0003924|GO:0005525
Adu02g01538 684 PANTHER BNAC09G43450D PROTEIN 70 684 - -
Adu02g01538 684 Pfam Elongation factor Tu domain 2 306 375 IPR004161 GO:0005525
Adu02g01538 684 Gene3D Translation factors 286 386 - -
Adu02g01538 684 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 70 684 - -
Adu02g01538 684 SUPERFAMILY Translation proteins 238 378 IPR009000 -
Adu02g01538 684 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 131 146 IPR031157 -
Adu02g01538 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 292 IPR027417 -
Adu02g01538 684 CDD BipA_III 392 470 - -
Adu02g01538 684 Pfam Elongation factor G C-terminus 483 567 IPR000640 -
Adu02g01538 684 CDD TypA_BipA 91 284 - -
Adu02g01538 684 CDD BipA_TypA_II 292 385 - -
Adu02g01538 684 CDD BipA_TypA_C 485 564 IPR035651 -
Adu02g01538 684 SUPERFAMILY EF-G C-terminal domain-like 485 600 IPR035647 -
Adu02g01538 684 Gene3D Elongation Factor G (Translational Gtpase), domain 3 393 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01538 Adu-Chr2 63037682 63046003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01538 92 219 Eukaryotic Initiation Factors Gene Family AT3G22980 43.846 3.23e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01538 K06207 - gmx:100785222 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01538 02 63037682 63046003 Adu02g01538 02 63037682 63046003 ECH