Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01532 ATGGCAGCACAAAATTCGGATGCATGTCCTTCTAGATCCTCTAGCATCTCTGAAGGGAGTGGTAATAACACCAACAATTCGAGGGACAATGATTTGGCAACCGAACTGGTGGATCAAGCCTCCAATTCGAGAACGATGTTGGCATTTGTAAAGCTCTCGAATGATGATTCATCGCTTCGTTGTTCTTCGAAAGTGCAGGAGCTCGATTTTTTCAACCCGGGAAAGAGGGTGACGAAAGAATCCTCGCCTTCTTTGGCTAACAACATTGATGAAGGAAAGAATAAAAACACCGAGGAGAAGACTACTTCAGAGTCTAGAACCTTCTCTTGTAACTTCTGCAACAGAAATTTCTCGTCTTCGCAAGCCCTAGGAGGGCACCAAAATGCACACAAACAGGAGCGCGCCATAGCGAAACGTCGCCAAGCAATCGACGCAACTGGCTTTGGTCACCCTCACTTTCCTTATTATTCTACTTACCCTAGCCTGACCTCTCACCCTTTATATAATAGGGCACTTGGGGTAAGGATCGACTCCATGATTCACAAACCTAATTCTTATCCTTGGTCTCGCCTTAGGTTCGATCATAATAACCATAATTGGTCACGGTCAGGGATGCTTGAGGGATTGCAACTAAATGGGGGAGGTTCTTCAAATTTGAATTTGTTTAGAGAAGATGATAACGGCGGTAGTAGAACTATTCCCCTATTCGGAGTTTCTTCTACAGATGTTGCTTCTACTTCTAATGCAGCCATCAATAACAACCCAACAATAAGGATTGATGATACTCATGATCAGAATCCAAAGCCAGATGAACCTTCCACTACTATGTCTCCAAGCCTTGATTTGTCGCTTAAGCTTTAA 861 0.4379 MAAQNSDACPSRSSSISEGSGNNTNNSRDNDLATELVDQASNSRTMLAFVKLSNDDSSLRCSSKVQELDFFNPGKRVTKESSPSLANNIDEGKNKNTEEKTTSESRTFSCNFCNRNFSSSQALGGHQNAHKQERAIAKRRQAIDATGFGHPHFPYYSTYPSLTSHPLYNRALGVRIDSMIHKPNSYPWSRLRFDHNNHNWSRSGMLEGLQLNGGGSSNLNLFREDDNGGSRTIPLFGVSSTDVASTSNAAINNNPTIRIDDTHDQNPKPDEPSTTMSPSLDLSLKL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01532 286 PANTHER ZINC FINGER PROTEIN JAGGED 6 286 IPR045320 GO:0003700
Adu02g01532 286 MobiDBLite consensus disorder prediction 246 286 - -
Adu02g01532 286 Gene3D Classic Zinc Finger 87 147 - -
Adu02g01532 286 MobiDBLite consensus disorder prediction 269 286 - -
Adu02g01532 286 MobiDBLite consensus disorder prediction 77 91 - -
Adu02g01532 286 MobiDBLite consensus disorder prediction 246 260 - -
Adu02g01532 286 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Adu02g01532 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Adu02g01532 286 MobiDBLite consensus disorder prediction 1 32 - -
Adu02g01532 286 MobiDBLite consensus disorder prediction 74 103 - -
Adu02g01532 286 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 6 286 - -
Adu02g01532 286 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01532 Adu-Chr2 62764270 62765130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01532 85 194 C2H2 Transcription Factor Family AT5G25160 45.161 2.95e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu02g01532 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01532 - - adu:107474629 546.199