Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01527 ATGGAATTCGAACTCCCAAACAAGGCCTTAACCACCACGTGCTTTTCGGAGCTGAATCCGCCGCTATCAGAGAAGGTTCTCGAAACCTTATCGGAATCCGGGTTCAACTTCTGCACGCCGGTTCAAGCCGCCACCATTCCCTTGCTCTGCAGCTTCAAGGATGTCGCCGTCGACGCCGCCACTGGTTCAGGAAAAACCCTAGCTTTTGTCGTCCCTCTCGTCGAGATTCTTCGACGCTCCTCTTCTAACCCCAAGCCTCATCAGGTACTAGGAATAATCATATCCCCCACAAGGGAGCTATCACATCAAATATATCATGTTGCACAACCTTTCATTTCAACTTTAGCGAATGTTAAGTCCATGCTGCTTGTTGGTGGAGTTGAAGTGAAATCAAACATGAAGCAGATAGAGGAGGAAGGCGCTAACATACTAATTGGCACACCTGGGCGGTTGTATGACATAATGAACCGGATGGATTTCTTGGATTTCAAAAACTTCGAGCTTTTGATTTTAGACGAGGCTGATAGACTTTTAGATATGGAATTCCAGAAGCAGATAACTTCCATTATATCTCTTTTGCCTAAGCTTTGA 591 0.4585 MEFELPNKALTTTCFSELNPPLSEKVLETLSESGFNFCTPVQAATIPLLCSFKDVAVDAATGSGKTLAFVVPLVEILRRSSSNPKPHQVLGIIISPTRELSHQIYHVAQPFISTLANVKSMLLVGGVEVKSNMKQIEEEGANILIGTPGRLYDIMNRMDFLDFKNFELLILDEADRLLDMEFQKQITSIISLLPKL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01527 196 Pfam DEAD/DEAH box helicase 39 194 IPR011545 GO:0003676|GO:0005524
Adu02g01527 196 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 46 196 IPR014001 -
Adu02g01527 196 SMART ultradead3 34 195 IPR014001 -
Adu02g01527 196 Gene3D - 3 196 IPR027417 -
Adu02g01527 196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 194 IPR027417 -
Adu02g01527 196 PANTHER ATP-DEPENDENT RNA HELICASE DDX55 23 192 - -
Adu02g01527 196 CDD DEADc_DDX55 26 195 - -
Adu02g01527 196 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 15 43 IPR014014 GO:0003724
Adu02g01527 196 PANTHER RNA HELICASE 23 192 - -
Adu02g01527 196 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 170 178 IPR000629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01527 Adu-Chr2 62705215 62706401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01527 3 194 Eukaryotic Initiation Factors Gene Family AT3G19760 30.729 2.91e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01527 K14809 - gmx:100801482 335.88