Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01518 ATGTTGGGAATGAATAACCATGTTGATCTGGTGGAGAAAATCACTCCCTGGAGAGAATCATGGAAAGTGCATGTTAAAGTTGTGAAGTTGTGGTACCACAAGAATCCTGGTTTGGATGCTTCACAAAATCTGTTGCATATGGTCTTAATGGATGAGAAGTTACACAAGATCCAAGCAACCATTAGAGATCAGCTTATATCAAAGTTTGCTTCCTCTTTACACGAAGGGGATCTGTATTTGATGAACCATTTTACAGTTGTACCAAACACTGGTATGAACAGAGTGACCACCCATCGTTTCAGACTTTTGTTCCAATACAAGACCTCTGTTATTTCTGTGGTATCTCCAAGGATTCCGCATTCCGGTTTGTGTTTGAGATCAATAGATGAAATTGATCAAATGACAACCGAGTACAATTTCCTTATTGACTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTAGCATCATATGGGAAGCTGCTCAAAGTAGTTGTGCTAGAAGTTTTCAGTCATGGCAAAAAGGTCCAATGCAATGTCTTTGGAGATGCTTGTGATCTCTTGGAGTATGATAAATTACAAAAATATCCAAGATCTCCGTTGATTGTGCTCGAGTCTTTTAAAATCAAAGCAATTGAAGGTGGAGTAGTTCTACAGAATGTGATCAATGTCTCTAGGTTATTTATTAATCCCGACATTCGTGAGTCTGTTGAGTTCCTAAGCAGATTTAGTGTATCCAGTTATGGATTCTCAAGACTTGTGACCAATGATCTTGGATACTTAATTTCTAAAGTTGATGGTGATTATTTCAATCCCAAAGAAATCTGTGATATTCAAGATATTCATTTAGATAACGGGGGTGCTCATTACTTTGTTATTGGGACAATTAATGAAGTTATAGATGAACCAAATTGGTGGTACTACTCATGCGTGTGTGGTCATGCCGTTGTTGACCATGAGGATCTCTACCTTTGTGATGCTTGTGGTTCATGTGTTGAACATGTGTTGGTCAAATATAGGATTCGTGTAAAGATTCATCATCGTGGGTGTGCTGTTTTGTTTGTTTTGCTTGATAATGTGGCAACAAAACTACTTGGAAAAACGTGTGCTGAAGCATTTCTCGGGGTAGATGAAGAATTTCCTGTTGATCCTAGTGTGCTTGCAGTCTGTCGGTCATATTCTCCAGAAATGTTTGGTGTTGTTGTTGGAGAGGAGAAAGTTTTCAAGGTTCAAATTCTTTCTGGAGTTGATCCAGATTACTCCGGGTCCTTTAAAGTTGTAAATGTGTTTAGTAATAATCTGGAAGCAGCTGCAATCCATGATTATGTGAATGCAAGGCTTCACGATCCGATTTTTGCACCAATCTATGATGCCTATTTGCAGTACGCAACTGCGAAAGATTACAAGACTCAAGTAGTGTGTGATAATTCTATTCAATCAGAAACTATTGAAGATATTATTACTGATCTGATTTCACCCAATCGCTGCTATTCTGATGTTGAGAACGGTGGTTTCGTTTTTATTTTGGGAACTATATCATCTGTTTTCAAGAAACATAAGTGGTGGTTCTCAACTTGTTTGTGTGGTTCTCTTGTGTCAGCTAATAAACAAAGTTTATCATGTGATCTATGTCAGCTTCAATGTATTGATGCTGTCCCAAGATTCTGCTTGAAGATTGTAGTGTCTCATGCCAATGGGAACAATATTTTTGTTCTTAAAGATCGTGAGGTTGTGCAACTAATAAAGATTAAATGCTCGAGGTTCTTGGATAGTCACCCAGAGTTGAATCAGGGATCTTATTGCAAAGTTGTTCCATTGAAACTAATTTCAAATCTTTTGCACAAAAAAGTTGTATTCATGGTTGATGCTAGGCCTGTGGGTTATGAGATGAATCGATCTGTGTATATTGTTCAACAAATTTGGGATGATGCCTCTGTTATTAATGTTTTTGAGGCTGTTTCTGAGATGAATGATCATAAGATTCGTGTTTTGGTTGATTCTTTGCCTGAAGTTGAAGACGCTTTAAGCCAATGTGGAAGTGATCATGACGCTGTGGAGGATCTAGATGCCTTTTAG 2082 0.3794 MLGMNNHVDLVEKITPWRESWKVHVKVVKLWYHKNPGLDASQNLLHMVLMDEKLHKIQATIRDQLISKFASSLHEGDLYLMNHFTVVPNTGMNRVTTHRFRLLFQYKTSVISVVSPRIPHSGLCLRSIDEIDQMTTEYNFLIDFVGIITGVRKERDVASYGKLLKVVVLEVFSHGKKVQCNVFGDACDLLEYDKLQKYPRSPLIVLESFKIKAIEGGVVLQNVINVSRLFINPDIRESVEFLSRFSVSSYGFSRLVTNDLGYLISKVDGDYFNPKEICDIQDIHLDNGGAHYFVIGTINEVIDEPNWWYYSCVCGHAVVDHEDLYLCDACGSCVEHVLVKYRIRVKIHHRGCAVLFVLLDNVATKLLGKTCAEAFLGVDEEFPVDPSVLAVCRSYSPEMFGVVVGEEKVFKVQILSGVDPDYSGSFKVVNVFSNNLEAAAIHDYVNARLHDPIFAPIYDAYLQYATAKDYKTQVVCDNSIQSETIEDIITDLISPNRCYSDVENGGFVFILGTISSVFKKHKWWFSTCLCGSLVSANKQSLSCDLCQLQCIDAVPRFCLKIVVSHANGNNIFVLKDREVVQLIKIKCSRFLDSHPELNQGSYCKVVPLKLISNLLHKKVVFMVDARPVGYEMNRSVYIVQQIWDDASVINVFEAVSEMNDHKIRVLVDSLPEVEDALSQCGSDHDAVEDLDAF 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01518 693 SUPERFAMILY Nucleic acid-binding proteins 10 113 IPR012340 -
Adu02g01518 693 Pfam Domain of unknown function DUF223 47 113 IPR003871 -
Adu02g01518 693 SUPERFAMILY Nucleic acid-binding proteins 126 248 IPR012340 -
Adu02g01518 693 Gene3D - 117 251 IPR012340 -
Adu02g01518 693 SUPERFAMILY Nucleic acid-binding proteins 502 630 IPR012340 -
Adu02g01518 693 Gene3D - 266 439 IPR012340 -
Adu02g01518 693 Gene3D - 471 649 IPR012340 -
Adu02g01518 693 Gene3D - 10 114 IPR012340 -
Adu02g01518 693 SUPERFAMILY Nucleic acid-binding proteins 273 433 IPR012340 -
Adu02g01518 693 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01518 Adu-Chr2 62160816 62164488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01518 2 371 Core DNA Replication Machinery Family AT5G08020 19.697 2.09e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01518 - - ahf:112695694 1229.93