Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01517 ATGGAGGGTGCGCCGATAGAGGCAGTATCGATAGAGGGTTACGAAAGAGGGAGCGAGGTTGCAAATCCGAGGAGGAGGCTTGCGATAGAGGGTGCGAGGGTTGCGACAGAGAGGAGGGTTACAATAGAAGATGTGAGAGAGGGTTGCAATAAAGGagCCCTTGGCCCCCGCATGGTCTCCACCGCCGCAAGCTACGCCTTCGCCCTCGCCCTCACCGACGTCGCCAAATCCAACAACACCCTCGACGGCACCACAACTGACATCGAGAAAATCGACGAGATCTTCTTCGATCTGCAGGTGTTCAACTTTTTCGCCAACCTACTAAATGGTGGTGGTGAAGCTCAAGTCGTAGCACTTAGTATAGATGAGATCAGAGCGAGACACCACTCGGCCACTCCTTCTTCCTTGACCACCACCGTAGCCTGTTCGCCAGAGATCGCCCACTCTTCCTCGCGTTCATCCCTCTCCGTCGCGTTCTTCCTCTCGCCATTGTTCCTCGCGTTCATCCCTCCCTCTTCGGGTTCAGACGTTCTCGCCGTCAGTGGTACTCAGTTCCTACCACATTGCCGTCCTCCTTTCGGTTCCCACCGTCAGTCCGTGGTCCTCTGTTCTTACCGCCTTGACGTCCTCCGTGCTTGCTGCGTTGCCGTACACAGTTCCTGCCGCATCGCCGTCCTCCGTTCTCGTCGGTTCGCCGTCCTCCTTTCAGCGAATCAACGTCCTCTGCTTCATTGTTCAGCACTTAAGCTTCAAACAAACATGGCTGACAAAGCGGTTACCATCAGAACAAGGAAGTTTATGACTAACAGGCTCCTCTCCAGAAAGCAATTCGTCATTGATGTTCTTCATCCAGGGAGGGCAAATGTTTCTAAGGCTGAGCTTAAGGAGAAGCTTGCTAGAATCTATGATGTTAAGGACCCCAACACCGTGTTTGTGTTCAAGTTCCGCACCCATTTTGGAGGTGGCAAATCCACTGGTTTTGGTTTGATTTATGACACTGTTGAGAATGCTAAGAAGTATGAGCCTAAGTACAGACTTATTAGGAATGGACTTGATACTAAGGTTGAAAAGTCGAGGAAGCAAATGAAGGAGAGAAAGAACAGGGCAAAGAAGATCCGTGGAGTAAAGAAGACCAAGGCTTCTGATTCTGCCAAGGCTGGAAAGAAGAAATGA 1173 0.5124 MEGAPIEAVSIEGYERGSEVANPRRRLAIEGARVATERRVTIEDVREGCNKGALGPRMVSTAASYAFALALTDVAKSNNTLDGTTTDIEKIDEIFFDLQVFNFFANLLNGGGEAQVVALSIDEIRARHHSATPSSLTTTVACSPEIAHSSSRSSLSVAFFLSPLFLAFIPPSSGSDVLAVSGTQFLPHCRPPFGSHRQSVVLCSYRLDVLRACCVAVHSSCRIAVLRSRRFAVLLSANQRPLLHCSALKLQTNMADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDSAKAGKKK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01517 390 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 259 361 IPR012678 GO:0003735|GO:0005840|GO:0006412
Adu02g01517 390 ProSitePatterns Ribosomal protein S24e signature. 319 341 IPR018098 -
Adu02g01517 390 PANTHER 40S RIBOSOMAL PROTEIN S24 254 390 - -
Adu02g01517 390 Hamap 30S ribosomal protein S24e [rps24e]. 257 359 IPR001976 GO:0003735|GO:0005840|GO:0006412
Adu02g01517 390 Gene3D - 251 385 - -
Adu02g01517 390 Pfam Ribosomal protein S24e 278 356 IPR001976 GO:0003735|GO:0005840|GO:0006412
Adu02g01517 390 MobiDBLite consensus disorder prediction 355 390 - -
Adu02g01517 390 PANTHER 40S RIBOSOMAL PROTEIN S24 254 390 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01517 Adu-Chr2 62111081 62115764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01517 254 385 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.879 1.09e-81 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01517 K02974 - gmx:100499852 241.506