Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu02g01517 | ATGGAGGGTGCGCCGATAGAGGCAGTATCGATAGAGGGTTACGAAAGAGGGAGCGAGGTTGCAAATCCGAGGAGGAGGCTTGCGATAGAGGGTGCGAGGGTTGCGACAGAGAGGAGGGTTACAATAGAAGATGTGAGAGAGGGTTGCAATAAAGGagCCCTTGGCCCCCGCATGGTCTCCACCGCCGCAAGCTACGCCTTCGCCCTCGCCCTCACCGACGTCGCCAAATCCAACAACACCCTCGACGGCACCACAACTGACATCGAGAAAATCGACGAGATCTTCTTCGATCTGCAGGTGTTCAACTTTTTCGCCAACCTACTAAATGGTGGTGGTGAAGCTCAAGTCGTAGCACTTAGTATAGATGAGATCAGAGCGAGACACCACTCGGCCACTCCTTCTTCCTTGACCACCACCGTAGCCTGTTCGCCAGAGATCGCCCACTCTTCCTCGCGTTCATCCCTCTCCGTCGCGTTCTTCCTCTCGCCATTGTTCCTCGCGTTCATCCCTCCCTCTTCGGGTTCAGACGTTCTCGCCGTCAGTGGTACTCAGTTCCTACCACATTGCCGTCCTCCTTTCGGTTCCCACCGTCAGTCCGTGGTCCTCTGTTCTTACCGCCTTGACGTCCTCCGTGCTTGCTGCGTTGCCGTACACAGTTCCTGCCGCATCGCCGTCCTCCGTTCTCGTCGGTTCGCCGTCCTCCTTTCAGCGAATCAACGTCCTCTGCTTCATTGTTCAGCACTTAAGCTTCAAACAAACATGGCTGACAAAGCGGTTACCATCAGAACAAGGAAGTTTATGACTAACAGGCTCCTCTCCAGAAAGCAATTCGTCATTGATGTTCTTCATCCAGGGAGGGCAAATGTTTCTAAGGCTGAGCTTAAGGAGAAGCTTGCTAGAATCTATGATGTTAAGGACCCCAACACCGTGTTTGTGTTCAAGTTCCGCACCCATTTTGGAGGTGGCAAATCCACTGGTTTTGGTTTGATTTATGACACTGTTGAGAATGCTAAGAAGTATGAGCCTAAGTACAGACTTATTAGGAATGGACTTGATACTAAGGTTGAAAAGTCGAGGAAGCAAATGAAGGAGAGAAAGAACAGGGCAAAGAAGATCCGTGGAGTAAAGAAGACCAAGGCTTCTGATTCTGCCAAGGCTGGAAAGAAGAAATGA | 1173 | 0.5124 | MEGAPIEAVSIEGYERGSEVANPRRRLAIEGARVATERRVTIEDVREGCNKGALGPRMVSTAASYAFALALTDVAKSNNTLDGTTTDIEKIDEIFFDLQVFNFFANLLNGGGEAQVVALSIDEIRARHHSATPSSLTTTVACSPEIAHSSSRSSLSVAFFLSPLFLAFIPPSSGSDVLAVSGTQFLPHCRPPFGSHRQSVVLCSYRLDVLRACCVAVHSSCRIAVLRSRRFAVLLSANQRPLLHCSALKLQTNMADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDSAKAGKKK | 390 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu02g01517 | 390 | SUPERFAMILY | Ribosomal proteins S24e, L23 and L15e | 259 | 361 | IPR012678 | GO:0003735|GO:0005840|GO:0006412 | |
Adu02g01517 | 390 | ProSitePatterns | Ribosomal protein S24e signature. | 319 | 341 | IPR018098 | - | |
Adu02g01517 | 390 | PANTHER | 40S RIBOSOMAL PROTEIN S24 | 254 | 390 | - | - | |
Adu02g01517 | 390 | Hamap | 30S ribosomal protein S24e [rps24e]. | 257 | 359 | IPR001976 | GO:0003735|GO:0005840|GO:0006412 | |
Adu02g01517 | 390 | Gene3D | - | 251 | 385 | - | - | |
Adu02g01517 | 390 | Pfam | Ribosomal protein S24e | 278 | 356 | IPR001976 | GO:0003735|GO:0005840|GO:0006412 | |
Adu02g01517 | 390 | MobiDBLite | consensus disorder prediction | 355 | 390 | - | - | |
Adu02g01517 | 390 | PANTHER | 40S RIBOSOMAL PROTEIN S24 | 254 | 390 | IPR001976 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu02g01517 | Adu-Chr2 | 62111081 | 62115764 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu02g01517 | 254 | 385 | Cytoplasmic Ribosomal Protein Gene Family | AT5G28060 | 87.879 | 1.09e-81 | 244 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu02g01517 | K02974 | - | gmx:100499852 | 241.506 |