LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu02g01505	ATGATAGCTCAGTTGCATAGTATGATTGCAACAATAATAATTGTTGTTGTTGTTGCAAAGATAAATGTGGGAGTGAATTCAGCTCCAGAAGCTGATAAGGTAACCAATTTGCCAGGGCAACCACCAGTGAAGTTCCAGCAATATGCTGGTTACATTACTGTGGATGAGAAGCAACAAAGATCTTTGTTTTACTACTTTGTTGAAGCACAAGTTGAACCTGCTTCCAAGCCATTGGTTCTATGGTTAAATGGAGGGCCTGGCTGTTCTTCTGTTGGAGCCGGAGCTTTCGTCGAACATGGTCCATTTAAACCAAGCGAAAATGTTCTTCTCAAGAATGATTATAGTTGGAACCAAGAGGCAAATATGCTGTACTTGGAATCACCGGCTGGTGTTGGTTTCTCCTACTCTGCCAATAAATCTTTCTATGAATATGTTAATGATGAAATGACAGCAAGGGATAATCTTGTATTCTTACAGAATTGGTTCACCAAATTCCCAGAGTACAAAAACAGTGACTTCTTTATTACAGGGGAGAGTTATGCAGGTCACTATGTACCTCAACTTGCACAACTCATTGTTCAAAGCAAGACAAAGTTCAATTTCAAGGGTATAGCAATAGGAAACCCTCTTATGGAATTCAACACAGATTTCAATTCAAGGGCAGAGTATTTCTGGTCCCATGGACTAATATCTGATTCAACTTATGAAATGTTCACTAAAGTCTGTAACTACTCCCAAATTAGGAGACAACTTCAAAGTGGAACATTAAATGGGGTTTGCGCAGCCGTAAATAAAATAGTGTCCACAGAAGTTGGGAGATATGTTGATGCATATGATATCACTCTTGATGTGTGTCTATCAGCAGCAGATCAACAAGCTTATGTGCTCAATCAACTTAGCCAACTGGGAGAGAAGATTGATGTGTGTGTGGAAGATGAAACAATCACATATTTGAATAAAAAAGATGTGCAACAAGCTTTCCATGCTAAGCTTGAAGGGATCACTAGATGGTCAACTTGCAGCGAGTTAGTATATTGGCCCAAAATACAAATACTTGATGTGAAAAAAAAGCTCTTAATTTGGTCTGGTATTAGAGTTCTAGTATACAGTGGTGATCAAGATTCAGTTCTGCCATTAACTGGAACAAGAACGCTTGTGAATGGGTTGGCTAAGGAGTTAGGACTTAATACAACAGAGTCTTATAGAGCATGGTTTGGAGGAAGACAGGTAGCTGGATGGACACAAGTATATGGTGACATGTTATCGTTTGCTACTATAAGAGGAGCATCTCATGAAGCTCCTTTTTCACAGCCAGAGAGATCACTTGTGCTGCTGAAAGCATTTGTTGAAGGAAAATCTCTTCCAGGAATAATCTCTCTAACGTGA	1386	0.3932	MIAQLHSMIATIIIVVVVAKINVGVNSAPEADKVTNLPGQPPVKFQQYAGYITVDEKQQRSLFYYFVEAQVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENVLLKNDYSWNQEANMLYLESPAGVGFSYSANKSFYEYVNDEMTARDNLVFLQNWFTKFPEYKNSDFFITGESYAGHYVPQLAQLIVQSKTKFNFKGIAIGNPLMEFNTDFNSRAEYFWSHGLISDSTYEMFTKVCNYSQIRRQLQSGTLNGVCAAVNKIVSTEVGRYVDAYDITLDVCLSAADQQAYVLNQLSQLGEKIDVCVEDETITYLNKKDVQQAFHAKLEGITRWSTCSELVYWPKIQILDVKKKLLIWSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKELGLNTTESYRAWFGGRQVAGWTQVYGDMLSFATIRGASHEAPFSQPERSLVLLKAFVEGKSLPGIISLT	461

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu02g01505	461	ProSitePatterns	Serine carboxypeptidases, serine active site.	175	182	IPR018202	GO:0004185
	Adu02g01505	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	112	124	IPR001563	GO:0004185\|GO:0006508
	Adu02g01505	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	421	434	IPR001563	GO:0004185\|GO:0006508
	Adu02g01505	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	161	186	IPR001563	GO:0004185\|GO:0006508
	Adu02g01505	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	125	135	IPR001563	GO:0004185\|GO:0006508
	Adu02g01505	461	Pfam	Serine carboxypeptidase	38	451	IPR001563	GO:0004185\|GO:0006508
	Adu02g01505	461	Gene3D	-	352	451	-	-
	Adu02g01505	461	SUPERFAMILY	alpha/beta-Hydrolases	25	455	IPR029058	-
	Adu02g01505	461	Gene3D	alpha/beta hydrolase	28	287	IPR029058	-
	Adu02g01505	461	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	12	458	IPR001563	GO:0004185\|GO:0006508
	Adu02g01505	461	ProSitePatterns	Serine carboxypeptidases, histidine active site.	421	438	IPR033124	GO:0004185
	Adu02g01505	461	PANTHER	CARBOXYPEPTIDASE	12	458	-	-
	Adu02g01505	461	Gene3D	-	309	345	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu02g01505	Adu-Chr2	61596875	61603942	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu02g01505	317	454	Calmodulin-binding Proteins	AT2G22960	25.180	1.06e-13	67.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu02g01505	K16297		-	gmx:100805028	745.347