Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01502 ATGGCGTCTAGCTCAATGCAATCTTCGTCATCGTGGAGTGCTAAGGACAACAAAGCCTTTGAGAGGGCTCTGGCTGTTTACGACAAGGACACCCCTGACCGATGGTACAACATTGCCCGCGCCGTCGGCGGGAAAACCCCGGAGGATGTGAAGCGGCACTATGAGCGTCTTGTTCATGACGTTAGGCACATTGAGTCAGGGCAAGTGCCATACCCAAATTACAAGAAGAGTGGAGGTTCTAATTAG 246 0.5203 MASSSMQSSSSWSAKDNKAFERALAVYDKDTPDRWYNIARAVGGKTPEDVKRHYERLVHDVRHIESGQVPYPNYKKSGGSN 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01502 81 Pfam Myb-like DNA-binding domain 10 56 IPR001005 -
Adu02g01502 81 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Adu02g01502 81 SMART sant 8 60 IPR001005 -
Adu02g01502 81 CDD SANT 18 58 IPR001005 -
Adu02g01502 81 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Adu02g01502 81 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Adu02g01502 81 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Adu02g01502 81 Gene3D - 2 71 - -
Adu02g01502 81 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01502 Adu-Chr2 61382923 61383682 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu02g01502 Myb_DNA-binding 4.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01502 - - ahf:112719426 166.392