Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01501 ATGAACTCAGCGGCGTCACAGGATCACTGGAGGAGTTACTTCAGGAAAGCGAATTCCGACATATTCAGCATCATTGACAACGCCATCACGGTGGCCGCTTCCGATTGCCCCAAGGAATTCAGGCTTCGCCGTGACGCCATTGCCGAGCTCCTCTTCTCCTGTAGGCTCGCGCGGTGCCGTGGATGTGACCGAGTGGAGCTCGCCGTCGATGGAGGCAGCGGCAAAGATGATTGTGGTGGTGGCGGCGGCGGCGGCCGCAAGAGCGGTGAGTCCGAGGTCGAGACGGGTGGGAGTAAAGAGAGCAAAGTCAACAGCAGCAGAGATGATAGGGGAGAGGTGAATGTTCAGATCGTGAGCAATTACAGCTATGGGGAAGCAGAAGCCTTGACGGATGAGATTGAAGAACAGTCTCTGTATGCTGATGAGGTCTTCAGGATCAGACAGGTTTTGCTTAATTCTCAAGAAGAGTCTGATTCAGTAATATTCGAGTCGTTGCGGAGGCTTCAGCTGATGGAGCTCACTGTGGATCTTCTGAAGGCCACTGAGATTGGTAAGGCTGTCACTCCTCTTCGAAAGCACGGCTCGAGGGATATTCGCCAACTTGCACGGACACTTATTGATGGCTGGAAAGTTATGGTGGATGAGTGGGTCAAGGCTACCACACCTATCACAGGTTCAGAAGGTACCCCAGATTCAGTAAAGCCGTCTACAGTTGATGAGGAAGAAGGGCTTCCATCACCTTCCATGGATGAAGGGGCTTTCTTTGCCACTCAAGCTGGTTCAATGGAACTCTCCCAGTTCTTTGATGGCATGGATGATTATGGAAGTGAGTTACCTTTGCCGTTTCTCATGCTTAGTCTAGCTTGCTTTTGCTCTACGGTTCTTTATTTGAATTCCCCACTTCTTAAGATTGATGATTATGAATGGAAACGATATTTCAGATCCTCAACAGAGTGGGGAATTCATCAAGAACCGTGA 978 0.5031 MNSAASQDHWRSYFRKANSDIFSIIDNAITVAASDCPKEFRLRRDAIAELLFSCRLARCRGCDRVELAVDGGSGKDDCGGGGGGGRKSGESEVETGGSKESKVNSSRDDRGEVNVQIVSNYSYGEAEALTDEIEEQSLYADEVFRIRQVLLNSQEESDSVIFESLRRLQLMELTVDLLKATEIGKAVTPLRKHGSRDIRQLARTLIDGWKVMVDEWVKATTPITGSEGTPDSVKPSTVDEEEGLPSPSMDEGAFFATQAGSMELSQFFDGMDDYGSELPLPFLMLSLACFCSTVLYLNSPLLKIDDYEWKRYFRSSTEWGIHQEP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01501 325 CDD TFIIS_I 140 214 - -
Adu02g01501 325 ProSiteProfiles TFIIS N-terminal domain profile. 141 216 IPR017923 -
Adu02g01501 325 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 135 227 IPR035441 -
Adu02g01501 325 MobiDBLite consensus disorder prediction 92 109 - -
Adu02g01501 325 SMART TFS2_5 140 215 IPR003617 GO:0005634
Adu02g01501 325 MobiDBLite consensus disorder prediction 73 109 - -
Adu02g01501 325 Pfam TFIIS helical bundle-like domain 165 213 IPR017923 -
Adu02g01501 325 MobiDBLite consensus disorder prediction 223 246 - -
Adu02g01501 325 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 7 275 IPR044805 -
Adu02g01501 325 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 132 224 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01501 Adu-Chr2 61211612 61215386 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Adu02g01501 Med26 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01501 - - aip:107625382 505.753