Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01471 ATGTCAATGGATACACCAATTTTTGAAGAGGCATTGTACGGCAGTGCGTATGACATGAGGGAGAATTCTAATTCAATCGACATTAATATTCCGTGTTTGAGTGAAGATGACACACCACATGAAGAACAGGAAAAAGAATTTGAAGACGCTATTCAGAAAAAGGATGATGCTACGGTGCCGGATCACACTGGAATTCCAATGGAGGAAATTCCGTACGTAGGATTGAGATTTGATTCGTTACAGCAGGCACAAGAGTTCTATTCTAATTATGCGAAGAAGGTTGGGTTTGTGACGAGGATTAGGAATACAAACTTTGATAAGACTAGGAAGGAATTAAAGGTACCTATTAATCAATCGATACACTGCAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGCAGCAATGCGGGTTAAGAGAATAACAACAGCCGGGTGCAAAGCAAGGATGTACGTGATGCTTGATAGGCATAATGATAATTGGTTGGTGACCAAATTAGAATTGAAGCACACCCACGCGTGTTCTGCCGAGCAAGCTGTGCATTACATCCGTGGGGTCACTCAAGAGGGTGACTTGTTTCGGGTGACCGTGAACGAGCAATACCTATTGTATGGGGAGCCTAGATCTTGGAAGTACAGTGTTGAGTTTGACCCCAAGACACATAAGGTTCGGTGTGAATGCAACATGTTTGGCTCAAGAGGTATTATTTGTTGCCACTGTCTTGCTGTGTTGTTTTATTACGGAGTAGACACAGTACCATCTTTCTATGTTATCCCTcgatggagcaagaatgtacagcgaaaacacactttcatcaagagcagccatgacgagAAGCGATCGGACGAAAGCCACAACTTATTTAGACGCCTGTGTTCACACTTCTACAATGTAGCACAAGATTTTGTTACATGTGAAGAGGAAGCGGCCATGTTACATTTGGGTCTTGATCAGTTAAGATCAAAGTTGCTTGATTGTCGTTCGAACTTGGTGTCTAGGCGTGTTCCAAGTTCACAAAACACCACGGCCACACATGGAGACCCCCATCTTGGTGAATCTGACATCCAAGGTCCCTCGAAGGTTTCAACGAAGGGTCGGCCGAGAATGAAGAGACTTGGATCTGAACTCGACGCCTCAATCAAGAACTCTATGCGAAGAAAGAAGAAGAATCCACCGCTGGATGTTCATCAAGCATTGAATCAAGATATAGTCTGTTGTTCTGCTAGGAGAGCGAATGGATCACAGGAACATGGCGGGTTCTTGTCGTTGTTAAACTCATTTCAGCATACTTAA 1293 0.4184 MSMDTPIFEEALYGSAYDMRENSNSIDINIPCLSEDDTPHEEQEKEFEDAIQKKDDATVPDHTGIPMEEIPYVGLRFDSLQQAQEFYSNYAKKVGFVTRIRNTNFDKTRKELKVPINQSIHCSREGYRESRVKAAMRVKRITTAGCKARMYVMLDRHNDNWLVTKLELKHTHACSAEQAVHYIRGVTQEGDLFRVTVNEQYLLYGEPRSWKYSVEFDPKTHKVRCECNMFGSRGIICCHCLAVLFYYGVDTVPSFYVIPRWSKNVQRKHTFIKSSHDEKRSDESHNLFRRLCSHFYNVAQDFVTCEEEAAMLHLGLDQLRSKLLDCRSNLVSRRVPSSQNTTATHGDPHLGESDIQGPSKVSTKGRPRMKRLGSELDASIKNSMRRKKKNPPLDVHQALNQDIVCCSARRANGSQEHGGFLSLLNSFQHT 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01471 430 ProSiteProfiles Zinc finger SWIM-type profile. 212 248 IPR007527 GO:0008270
Adu02g01471 430 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 176 IPR031052 GO:0006355
Adu02g01471 430 PANTHER OS01G0607050 PROTEIN 208 325 - -
Adu02g01471 430 Pfam SWIM zinc finger 224 247 IPR007527 GO:0008270
Adu02g01471 430 Pfam FAR1 DNA-binding domain 85 174 IPR004330 -
Adu02g01471 430 PANTHER OS01G0607050 PROTEIN 69 176 - -
Adu02g01471 430 MobiDBLite consensus disorder prediction 335 374 - -
Adu02g01471 430 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 208 325 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01471 Adu-Chr2 59366915 59371028 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu02g01471 FAR1 6.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01471 - - aip:110263722 483.026