LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu02g01423	ATGGCCAAGGCTTCTGAGGCATGTGCCTTTCTCAAGAGATGTCCTTCACTGACATTGGGTTCCATGTTGGAGGAGATTGCCACTATTCTTCCTGGCCATGAATTTGCTTCTGTTAGGGCTGGGGTGGAGATGGCAATAATTGATGCTGTTGCAAATAGTATTCGTGTGCCATTATGGAGGCTTTTTGGTGGATCCTCAAATACCATAACCACTGATATAACGGATACTGTTAGAGAGGGTGAACATGTTTTTGGTGTTGCTCACATTTTTGCATCATTCAATGACACCTTTATTCATGTGACTGATTCGTCTAGAAAGGAAACCCTTGTCCACATCACTGGTAAGTGTGCTTCTCTTCCCATTGCATTAAGCTATAAACAAAGATTCTTATTACATGGATACTTTATTCTATAA	414	0.4106	MAKASEACAFLKRCPSLTLGSMLEEIATILPGHEFASVRAGVEMAIIDAVANSIRVPLWRLFGGSSNTITTDITDTVREGEHVFGVAHIFASFNDTFIHVTDSSRKETLVHITGKCASLPIALSYKQRFLLHGYFIL	137

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu02g01423	137	Pfam	Ribosomal protein S11	85	116	IPR001971	GO:0003735\|GO:0005840\|GO:0006412
	Adu02g01423	137	PANTHER	O-SUCCINYLBENZOATE SYNTHASE-RELATED	3	77	-	-
	Adu02g01423	137	Gene3D	-	13	79	IPR029017	-
	Adu02g01423	137	SUPERFAMILY	Enolase N-terminal domain-like	22	64	IPR029017	-
	Adu02g01423	137	SUPERFAMILY	Translational machinery components	80	117	-	-
	Adu02g01423	137	Gene3D	Ribosomal protein S11	80	122	IPR036967	GO:0003735\|GO:0005840\|GO:0006412
	Adu02g01423	137	PANTHER	DIPEPTIDE EPIMERASE	3	77	-	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu02g01423	Adu-Chr2	55150136	55151507	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu02g01423	70	114	Cytoplasmic Ribosomal Protein Gene Family	AT3G11510	73.333	1.64e-16	69.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu02g01423	-		-	gmx:100793110	128.642

Showing 1 to 1 of 1 entries