Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01398 atgattgtcaagCTTTCTCTTCTCCTTGCACCACATCCTCACACGGCTCTGCTACACCACACCACCACCGCGGCTCTCTTACGACGCAACGACGCCGCAACTCTCCTACGTTGCACCACCACCTCGCTGTGCTCTTCTGCTTCTTTGCTCGCCGCTGCTTTCTTGTGCTCCGCATCTCCTTTGCTAGTTGTGCCGCCTCTGCTCCATCCATCCCTGCTCGATTCGCTTTCCCTCATCACAATAGGTAATGGAAGATCTCTGGACTGTCTAGCAGATAGCAACCATAAGATTGGGAATTGCTTTGGTGCTTCAAATTGGTTTAGAGAGAGTGATGATAGTTATACTGCTGAGAAGCCACGGGAACGAGTTTTTTATGTGCAGGATAAATACAAAGTATACAATCTTTGTTTTGAGTGGCTGTATGATGCATCATTGTTTGAGGGAAAGGTGGCTAGCTTTCCATTTGATGACCATAATTGCCCCCCACTTCAACTGATTATCTCATTCTGTTATAGTGCATACCCATGGTTGAAGTTAGATATTGAGAATGTTGTGATTGTCCATTGTAAGGCTGGAATGGCAAGAACAGGGTTGATAATTTCCAGTCTTCAATTATTCTTAAAGGTGAGTAGTATCTAA 639 0.4444 MIVKLSLLLAPHPHTALLHHTTTAALLRRNDAATLLRCTTTSLCSSASLLAAAFLCSASPLLVVPPLLHPSLLDSLSLITIGNGRSLDCLADSNHKIGNCFGASNWFRESDDSYTAEKPRERVFYVQDKYKVYNLCFEWLYDASLFEGKVASFPFDDHNCPPLQLIISFCYSAYPWLKLDIENVVIVHCKAGMARTGLIISSLQLFLKVSSI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01398 212 ProSiteProfiles Phosphatase tensin-type domain profile. 78 212 IPR029023 -
Adu02g01398 212 Gene3D Protein tyrosine phosphatase superfamily 120 211 IPR029021 -
Adu02g01398 212 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 212 IPR000387 GO:0016311|GO:0016791
Adu02g01398 212 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 127 209 - -
Adu02g01398 212 ProSitePatterns Tyrosine specific protein phosphatases active site. 187 197 IPR016130 GO:0016311|GO:0016791
Adu02g01398 212 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 127 201 IPR029021 -
Adu02g01398 212 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 127 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01398 Adu-Chr2 52331211 52336359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01398 127 208 Protein tyrosine phosphatase (PTP) family AT3G19420 79.268 3.53e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01398 K01110 - pvy:116142499 154.451