Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01396 ATGTCATTATATTGCTCTGATTGGGCCTGCTATGGTGTTTTGAGGTTTGTTATGGAAAATGGCGCCAAGGGATGCGAGGTCATCGTTAGTGGCAAGTTGAGGGCTCAACGTGCTAAATCCATGAAGTTCAAGGATGGGTACATGATTTTCTCAGGGCAACCAGTCAAGGACTACATTGATTCTGCTGTAAGACATGTACTCCTTAGGCAGTTCAGTATATACTTTTAG 228 0.4342 MSLYCSDWACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFKDGYMIFSGQPVKDYIDSAVRHVLLRQFSIYF 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01396 75 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 8 70 - -
Adu02g01396 75 SUPERFAMILY Ribosomal protein S3 C-terminal domain 8 69 IPR036419 -
Adu02g01396 75 Gene3D - 6 73 IPR036419 -
Adu02g01396 75 Pfam Ribosomal protein S3, C-terminal domain 9 70 IPR001351 GO:0003735|GO:0006412
Adu02g01396 75 PANTHER BNAC06G00510D PROTEIN 8 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01396 Adu-Chr2 52070249 52070756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01396 9 70 Cytoplasmic Ribosomal Protein Gene Family AT2G31610 88.710 6.91e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01396 K02985 - sspl:121800015 122.864