LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu02g01395	ATGGCTCAGCCGTCATGCTCAGCGGCGCAACTGGCACAATACTTCGGCCCCAACGCCACCAACGCTGCAGCCGCTGCAAGTCTCATCTGCGATCAGTTCACCGCCGTGAGTATGCAGTACAAAGACACCAAGCACGCGGTGGACAGCACCTACCTCCTCTTCTCAGCCTATCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTTACCAACGTCCTCGACGCCGCCGCCGGCGGCCTCTTCTACTACCTATTCGGTTTTGCCTTTGCTTTCGGCGTCCCCTCCAATGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAGCAAGTTCCTTCAGAAGCTCAGGATTTTGACTACAGCAACTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCTGGCATCACCAGCGGCTCTATCGCGGAGCGGACGCAGTTCGTCGCTTACCTCATCTACTCATCCTTCCTCACTGGCTTCGTCTACCCCGTTGTGTCGCATTGGATCTGGTCCACCGATGGGTGGGCCAGTGCCTTCAACACAGGGAACCTCCTCTTCGGATCTGGAGTCATCGATTTTGCGGGATCCGGAGTCGTTCACATGGTCGGTGGCATTGCCGGTTTATGGGGTGCCCTAATTGAGGGGCCCAGAATAGGCCGTTTCGATCACACCGGCCGAGCGGTGGCTTTACGTGGGCACAGTGCATCATTGGTGGTACTTGGTACTTTCATGCTCTGGTTTGGTTGGTATGGATTTAACCCTGGCTCTTTTAACAAGATTCTAGTTTACTACGACGAATCTGGCAATTATTATGGTCAATGGAGTGCTGTTGGTAGGACCGCAGTAACTACAACCTTAGCCGGTTGTACGGCCGCCCTAACAACACTTTTTGGGAAAAGGATATTGTCTGGTCACTGGAACGTGACTGATGTTTGTAACGGGTTGCTAGGCGGGTTCGCAGCGATCACGGCCGGATGCTCTGTCGTGGAGCCTTGGGCTGCAATTGTGTGCGGCTTTTTTGCCTCCTTGGTTTTGATTGGCTGCAATAAATTGGCTGAAAAAGTCAAATATGACGACCCGTTGGAGGCCGCTCAGCTTCATGGCGGCTGCGGCGCGTGGGGTGTGATTTTCACCGCTCTCTTTGCGAAGGAGGAGTATGTGAAACAGGTCTACGGGTCGGGTCGGGGGCACGGGCTGTTGATGGGTGGTGGCGGAAAACTGCTGGCGGCGCATGTGATTCAGATTCTGGTTATTACTGGTTGGGTGAGTGCTACAATGGGTCCACTTTTCTTTGTTTTGAATAAGATGAAGTTGCTTCGGATCTCACCGGAGGATGAACTCGCGGGTATGGATCTGACCCGACATGGTGGGTTTGCTTATGCTTACGAGGACGATGAATCGCACAAGCATGGGATTCAGTTGAAAAGAATTGAGCCAAACGCTTCCTCAACTCCTACCACAGAATGA	1506	0.5432	MAQPSCSAAQLAQYFGPNATNAAAAASLICDQFTAVSMQYKDTKHAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGVPSNGFIGRHFFGLKQVPSEAQDFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWIWSTDGWASAFNTGNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHTGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVYYDESGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFFASLVLIGCNKLAEKVKYDDPLEAAQLHGGCGAWGVIFTALFAKEEYVKQVYGSGRGHGLLMGGGGKLLAAHVIQILVITGWVSATMGPLFFVLNKMKLLRISPEDELAGMDLTRHGGFAYAYEDDESHKHGIQLKRIEPNASSTPTTE	501

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu02g01395	501	Pfam	Ammonium Transporter Family	51	473	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Adu02g01395	501	Gene3D	Ammonium transporter AmtB like domains	26	492	IPR029020	-
	Adu02g01395	501	SUPERFAMILY	Ammonium transporter	45	454	-	-
	Adu02g01395	501	ProSitePatterns	Ammonium transporters signature.	205	230	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Adu02g01395	501	PANTHER	AMMONIUM TRANSPORTER	5	495	-	-
	Adu02g01395	501	TIGRFAM	amt: ammonium transporter	48	473	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Adu02g01395	501	PANTHER	AMMONIUM TRANSPORTER 1 MEMBER 1	5	495	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu02g01395	Adu-Chr2	51820801	51822719	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu02g01395	5	499	Inorganic Solute Cotransporters	AT4G13510	80.594	0.0	810

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu02g01395	K03320		-	gmx:100818774	833.943

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