Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01392 ATGCAAGCCTTTGACTCCAATATGAGCATCAGTGATCATTTGCAACCCCAATCAACTAATAATGTAAAACCAAACTATGTTTCAAGCCACCCCAACAATATTCAAATTCCTCAAACTCAAGCCTCTTTCTCTATGCCTCCAACATCCTCAAACTTAAGCAACCGCAAGCCCTTCTTGAAGAACATCTCAATCCCTTCAACAAGACCAGCCCTCACAATGACCTTCACACAACAAAATGAAAGAACAACCGTTAATTGCAGCAACCAAAGTTTCTCGGAAAATTGTTATCCGAACGAGGATAAGCATTATAGAGGCGTTAGGAGACGACCATGGGGGAAGTTTGCCGCAGAGATTCGCGACCCGAATCGGAAAGGATCCAGGGTGTGGCTCGGAACATTTGACACAGCCATAGAAGCTGCTAGAGCATACGATAGAGCTGCTTTCAAGATGAGAGGAAGCAAAGCTATACTGAACTTCCCTATTGAAGTTGGAGAATACTCTAAAGAATGTTCAGTTTCTTGCTCAATAATGAAGGTTGGTGGGAAGAGGAGAAGAGAAAATGATGAAGAGGGTAGTGAAAATGTTGTGGAGAGTAACAATAAGAAGCAAGTGAAGAAAGAGGAGTGCTTTACGGCATGTCCTTTGACACCATCGTGTTGGAAAGGGTTTTGGGACACCGAAGTTATGGGAACAATCTTTAGTGTTCCTCCTTTGTCACCTTTATCTCCACTCATGGTTGTTTGA 744 0.4288 MQAFDSNMSISDHLQPQSTNNVKPNYVSSHPNNIQIPQTQASFSMPPTSSNLSNRKPFLKNISIPSTRPALTMTFTQQNERTTVNCSNQSFSENCYPNEDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAARAYDRAAFKMRGSKAILNFPIEVGEYSKECSVSCSIMKVGGKRRRENDEEGSENVVESNNKKQVKKEECFTACPLTPSCWKGFWDTEVMGTIFSVPPLSPLSPLMVV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01392 247 Gene3D AP2/ERF domain 101 163 IPR036955 GO:0003700|GO:0006355
Adu02g01392 247 CDD AP2 101 161 IPR001471 GO:0003700|GO:0006355
Adu02g01392 247 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
Adu02g01392 247 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Adu02g01392 247 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Adu02g01392 247 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 236 - -
Adu02g01392 247 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 19 236 - -
Adu02g01392 247 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Adu02g01392 247 Pfam AP2 domain 102 152 IPR001471 GO:0003700|GO:0006355
Adu02g01392 247 SUPERFAMILY DNA-binding domain 102 162 IPR016177 GO:0003677
Adu02g01392 247 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01392 Adu-Chr2 51205175 51206441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01392 48 240 AP2-EREBP Transcription Factor Family AT5G51190 50.754 7.46e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g01392 AP2 1.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01392 K09286 - gmx:100795866 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01392 02 51205175 51206441 Adu02g01392 02 51205175 51206441 ECH
Adu06g01138 06 15099914 15103868 Adu02g01392 02 51205175 51206441 PCT