Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01383 ATGGCAAAAGGCAACGGCGGCGAAGATGTTCCAACAAATCTTGTACCTTCCAAGCGTTCATCAAAGAGGAGCAGAGCAGTAGAAGTTCATAATTTGTCAAAAAAGAGAAGAAGGAGAAGGATCAATGAAAAAATGAAGGCCTTGCAACATCTAATTCTGAATTCTATCCGGTCGGCTAAGATGAAGCTAGCAAACTTTTGTGTCATCAACACATCAAGTCTATATATGGCATCAATGAGTATCTAA 246 0.3943 MAKGNGGEDVPTNLVPSKRSSKRSRAVEVHNLSKKRRRRRINEKMKALQHLILNSIRSAKMKLANFCVINTSSLYMASMSI 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01383 81 PANTHER TRANSCRIPTION FACTOR SPATULA 14 55 - -
Adu02g01383 81 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 14 55 IPR031066 -
Adu02g01383 81 MobiDBLite consensus disorder prediction 1 38 - -
Adu02g01383 81 Gene3D - 15 80 IPR036638 GO:0046983
Adu02g01383 81 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 25 79 IPR011598 GO:0046983
Adu02g01383 81 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 55 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01383 Adu-Chr2 49902079 49903240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01383 17 81 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 47.692 1.45e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01383 - - vvi:100245419 77.7962