Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01380 ATGGGTGGCAGTGTTAGTAAGAGTACTAGGAAGAGGAGATTCTCAGAAAAATATGTAACGAATTTGAAGGAGAAAGTGATGGTTCTCCAAGAAGAGATAAAGGACGTGATGTATGAGAGGGAGAAGGAGAGTAGGAGCTACGAGAGAGAGATAATGGTGTTCACTTTCAAGGAGGCAGATTGGAAACAAGAAGGGAAAAGAATGAGGGAGGAAGTGAAGATGCTAAGGAAGATGGTTGAGGAGAAAGAAGAGAGGATAAGAGATTTGGAAGAGAAGAGTAAGAAGGGTAGTAGAAGTAGTAGTGATGAGAAAGAGTGGGAGCAAATGGAGACAAAGCTATTAGTTGAACAGATGAAAGAAGAGAGAGTAAGAAGAGATGAAGCTGTTGAGAAGTGGAAGCATCTCTATCTTGCTATCAAGACTGAGCTTGATGACCTCATTCACAGGACATATCATGGGGACGGTCTATATTGGAAGGCAGAGGAAAAGGAGATCCAAATGGAAACTATGAAGAAAGAACTTCAAGACAAGGAAGAAACAATCAAAGCATTAAAATCTCATCTCGATTCGTTGGAGCAAGAGAAGTACAAAAAGGAGAGGGAATTTGACTTGTTAAGGCAAAGCTTGAGGATCATGAATGACAAGAAGGTGGTGACTGAAAAGCTCACCGTTTCAATCACGATACTTCTACAAATCTACACACTCATCCCTTCTAAATCCTCCATCAGTGGCGCATCTCAGCTTTGGTTCAGTCGCACAGAAGCTCCGTCACACCTGTTCCCGGATCTTCTCGGGGTGTTGCTCGCCTCTCTCCTTTCAAATCCAAATCTGCAATCCGCTAATTTAGCCAAAGTTTGGAGTTTCTATCACATGCTGGTTAGTGCAGTGAAACGTGGAAGGATTCAAGTTGATGGTGAGAGGGTACCAGTTTCATACATAATTAAATCATCACAGAAGATTAGCCATTTCGTACACAGGCATGAACTGCCTGTGATGGCTTGTGAGGTTCTGATTCTCCAAAAAGAACTAGACGTGCTGACTGTTTGTAAACCTGCATCTGTCCCTGAGCATCACATTCGAACTGGTTGTGGTTCTGTGTCTGTTATAGTGTATGGGGATCCTGAGAAACCAGCTCTGATCACTTATCCAGACCTAGCACTAAATTATATGTCATGTTTCCAAGGATTATTTTTCTGTCCAGAGGCAGCTTCTTTGCTGCTTCACAACTTCTGCATATATCATATCAGTCCTCCTGGACACGAGAGCTGGTACCAGGAGGTATCAAAGCTAAAGGCAAAGTATGAGTCTCTACAAAGGACTCAGAGGCACTTGTTTGGGAAAGATCTTGGACCATTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTTGAAGGTTCTTTAGCACAGGCCAGGCAGAGAAAACTAGTTGTTGATGCCAATATAGACTATAATGCTCGGGAAGGGAGGAGCATAGCGGAAGTGAGCACCTTAATCTCTATAGCTGACAGAGGGTTTTGGCTTCTTGCACTGGCTACTTTATTTGCTAAGGATATTAATAGTCCATATACTGTGTCTATAAAGATTAGGGCAGTGCTACGGTGA 1605 0.428 MGGSVSKSTRKRRFSEKYVTNLKEKVMVLQEEIKDVMYEREKESRSYEREIMVFTFKEADWKQEGKRMREEVKMLRKMVEEKEERIRDLEEKSKKGSRSSSDEKEWEQMETKLLVEQMKEERVRRDEAVEKWKHLYLAIKTELDDLIHRTYHGDGLYWKAEEKEIQMETMKKELQDKEETIKALKSHLDSLEQEKYKKEREFDLLRQSLRIMNDKKVVTEKLTVSITILLQIYTLIPSKSSISGASQLWFSRTEAPSHLFPDLLGVLLASLLSNPNLQSANLAKVWSFYHMLVSAVKRGRIQVDGERVPVSYIIKSSQKISHFVHRHELPVMACEVLILQKELDVLTVCKPASVPEHHIRTGCGSVSVIVYGDPEKPALITYPDLALNYMSCFQGLFFCPEAASLLLHNFCIYHISPPGHESWYQEVSKLKAKYESLQRTQRHLFGKDLGPLSIKELQNLEKQLEGSLAQARQRKLVVDANIDYNAREGRSIAEVSTLISIADRGFWLLALATLFAKDINSPYTVSIKIRAVLR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01380 534 PANTHER GOLGIN FAMILY A PROTEIN 1 223 - -
Adu02g01380 534 Pfam K-box region 420 476 IPR002487 GO:0003700|GO:0005634|GO:0006355
Adu02g01380 534 Coils Coil 160 208 - -
Adu02g01380 534 ProSiteProfiles S4 RNA-binding domain profile. 295 336 - -
Adu02g01380 534 Coils Coil 454 474 - -
Adu02g01380 534 MobiDBLite consensus disorder prediction 86 106 - -
Adu02g01380 534 Gene3D alpha/beta hydrolase 348 450 IPR029058 -
Adu02g01380 534 Pfam Ndr family 356 429 IPR004142 -
Adu02g01380 534 Coils Coil 19 39 - -
Adu02g01380 534 Coils Coil 65 99 - -
Adu02g01380 534 Coils Coil 420 440 - -
Adu02g01380 534 PANTHER GOLGIN FAMILY A PROTEIN 1 223 - -
Adu02g01380 534 ProSiteProfiles K-box domain profile. 420 505 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01380 Adu-Chr2 49778219 49784982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01380 421 478 MADS-box Gene Family AT2G45650 62.069 1.15e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01380 - - gmx:100815580 311.227