Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01328 ATGAGTAAGCTTCAGAGTGATGCACTGAGAGAAGCAATCACTGGGATAGTGGCTGATTCCAAAGAGAAGAATAGGAAGTTTGTGGAGACCATTGGGCTCCAAATTGGACTCAAAAACTATGACCCACAAAAGGATAAGCGTTTCAGCGGTTCTGTAAAGTTGCCACACATCCCAAGGCCCAAGATGAAAATAGGCAGAGAAAATGGGATTGGATTGGATGGACTCATTAAGCAGATTCCTCGTCTCTTGGGTCCTGGTCTCAACAAGACAGGAAAGTTTCCCACACTTGTTACCCACCAAGAATCCCTCGAGTCTAAAGTCAATGAGACCAAGGCTATGGTGAAATTTCAGCTTAAGAAGGTGCTCTGCATGGGAGTAGCTGTAGGCAATGTAAGCATGGAGGAAAAGCAAATCTTCCATAACGTACAACTGAGCGTTAACTTCCTTGTGTCCTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCTTGTATCTGAAGAGTACCATGAGAAAATCCTACCGTGTCTTTTGA 531 0.4388 MSKLQSDALREAITGIVADSKEKNRKFVETIGLQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKIGRENGIGLDGLIKQIPRLLGPGLNKTGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFHNVQLSVNFLVSLLKKNWQNVRCLYLKSTMRKSYRVF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01328 176 Pfam Ribosomal protein L1p/L10e family 74 169 IPR028364 -
Adu02g01328 176 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 64 - -
Adu02g01328 176 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 74 174 - -
Adu02g01328 176 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 66 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Adu02g01328 176 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 71 176 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Adu02g01328 176 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 2 64 - -
Adu02g01328 176 CDD Ribosomal_L1 9 175 IPR028364 -
Adu02g01328 176 Gene3D - 115 168 - -
Adu02g01328 176 Gene3D - 1 66 - -
Adu02g01328 176 SUPERFAMILY Ribosomal protein L1 3 176 IPR023674 -
Adu02g01328 176 Gene3D - 77 114 IPR016095 -
Adu02g01328 176 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 74 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01328 Adu-Chr2 42842556 42844741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01328 1 176 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 67.593 7.94e-96 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01328 K02865 - gmx:100527698 296.204