Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01313 ATGAACTCCAACAACACCACCTCCAATACTCAGTCAATGGTGACACCAACGCCAACTGCCACAACCGCCACCACCGCCACTGATGCCTCTGCCAAGAAGGTCAGAAAGCCTTACACCATTACCAAGTCCAGAGAGAGCTGGACTGACGAAGAACACGACAAGTTTCTAGAAGCTCTTCAGCTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTAGGATCCAAAACAGTTATTCAGATCCGAAGCCATGCCCAAAAATACTTTTTGAAAGTTCAAAAGAATGGAACAGTAGCACATGTTCCTCCTCCTCGCCCTAAGCGCAAAGCCGCACATCCCTACCCACAAAAGGCATCAAAAAATGTTTTGATGGCACTGCCAGCATCCATTGCTTATGCTCCTTCGACAAATGCCCTTGCACCTGGGTATGCCACATGGGATGAAGCTTCTCTGCTGGTGAACACCGGATCAAATAAATCATTGACCTGTCAAGATGAACTCAGCAATCTTCATGGAAACGAAGGCATGCATATTTCTTTTAAATTATTGTTTGGGATAACACAGATTAGTAACAGCAGTCTTAATGGTGTCGGGAACTCAACTAGAAAGCTATTGTCTTCTGAGATACCAAAGCAAGGGAAACCAGCGCCAGTTATTCATGGTTTGCCAGATTTTGCCGAAGTTTACAGCTTCATTGGAAGTGTTTTTGATCCTGATACAAATAACCATGTCGAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGAATTTGAGCCGATGCAATTTGTTAATTTGTTAGGTAGGTCAAATTTGGAAGGAAGACTTGGGAGAATTTGCTTAGCCAGCAGTGAATTTTGA 909 0.4257 MNSNNTTSNTQSMVTPTPTATTATTATDASAKKVRKPYTITKSRESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLMALPASIAYAPSTNALAPGYATWDEASLLVNTGSNKSLTCQDELSNLHGNEGMHISFKLLFGITQISNSSLNGVGNSTRKLLSSEIPKQGKPAPVIHGLPDFAEVYSFIGSVFDPDTNNHVEKLKEMDPINFETVLLLMRNLTVNLSSPEFEPMQFVNLLGRSNLEGRLGRICLASSEF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01313 302 Gene3D - 47 94 - -
Adu02g01313 302 PANTHER SWI/SNF COMPLEX-RELATED 14 280 - -
Adu02g01313 302 ProSiteProfiles Myb-like domain profile. 39 89 IPR001005 -
Adu02g01313 302 PANTHER PROTEIN REVEILLE 8 14 280 - -
Adu02g01313 302 Pfam Myb-like DNA-binding domain 44 89 IPR001005 -
Adu02g01313 302 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 91 IPR006447 GO:0003677
Adu02g01313 302 SMART sant 43 91 IPR001005 -
Adu02g01313 302 CDD SANT 46 89 IPR001005 -
Adu02g01313 302 ProSiteProfiles SANT domain profile. 42 95 IPR017884 -
Adu02g01313 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Adu02g01313 302 MobiDBLite consensus disorder prediction 1 34 - -
Adu02g01313 302 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Adu02g01313 302 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01313 Adu-Chr2 41194889 41199039 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu02g01313 Myb_DNA-binding 1.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01313 - - adu:107474168 494.967