Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01311 ATGGAGTCCCATTTTGGTGAACCGGTTTCTCATTCCCCAGCATCCTTCACCAATGGCAATACCATCCATTCAAGTGACAATCTTCTCAATTTTTGGGATGTTGAAGGTAAAAAGTCTAATAAGGCAATAGACTGTACGAACATTAATGAGTTTGGAAGTGATGACACGAATCTTGTTGATGAGTTACTAGATCATAGTTGCCTTGCCGAAGATGAAATACCAAGAGTTGAAATGCAGTTTAATCATTTGAAGCTGGCCCAAGATTTTTATGCAACCTATGCAAAGAAAGTAGGTTTTGTAAGTAAGATAAGGAACACAAATTATGACAGGATGACTAAGGAACCGATTAACCAATCTATTCATTGTAATCGGGAGGGTTTCCGTGGATCTTGTGTCAAAGCACCCACACGGAAGAACATGGTTGCAGCTGTGGAGTGCAGAGCAAGGGTATATGCAAATTTTGACAGGGAGAAGCAGGATTGGGTTTTGCTGAAGGTTAATGATGAGGCGGGCATTCGACCCGACAAGATATTTCTAGCATTGGCTAACGAGATTGGTGGGCCGTCGAACCGAGACTTCTCCGAGAAGGATGTCAGGAACTACATCTCATCAAGACTCCGATTCACTAATGTCAACGTCGATGTCAAGGAGATGCTGGATCACTTCATGCGAATGAAGGAGATGAATCCGAACTTCTTCTATGTAGTAAATGTGGACGATGATTACAAATTTAGGAGTGCGGTGTGGGTGGATGCACGGTGCAGGGCTTCTTATGAATACTATGGAGACGTGTTGGATGTTAATAAATGTGGTTGTTTTTACTTTAGGCATGGTTTGCCGTTCGCCACTTTCGTTGGTGTGAACCACCATGGTGACTCGGCCTGGGTAAAAGTGGAACAAGAAATACTAGCCTATGAGAAGACCCGGTATGTTACGTACAACGTCCATTTCGACCGTTTGACTCACGAGGAATTTGTGAATGGAGACGATGAAGCAGCCATGTTGCATGCTGCTCTAGATGATGCAAGGGTCAAGCTAGTTGATTACCGTGCCAAGATGCGGAATAAGGCTGTCGCTGATGCACACACTAGCATCGCCACAGAGATTTTTCCTGTGGTGGCCACAGGGGACATTCAATGCCCATCAAAGGTAACTACGAAGGGTCGGCCAAAAGGTAAAAGACTCAGATATGAGATGGAAAAGTCAATCAAGCAATCCATGCAGAGAAAGCGGAAGAATTCAGACCAGATAAGTATCGATAATCGTGTAGAATCCTGCGAAAATATAGATTTGGATGCTCCCGCTCGACAGATTGGTCTGCAAGGAGTTGGTGGATTCATGTCCCTATTAAACTCTTTCGGCAATACCTAG 1371 0.4406 MESHFGEPVSHSPASFTNGNTIHSSDNLLNFWDVEGKKSNKAIDCTNINEFGSDDTNLVDELLDHSCLAEDEIPRVEMQFNHLKLAQDFYATYAKKVGFVSKIRNTNYDRMTKEPINQSIHCNREGFRGSCVKAPTRKNMVAAVECRARVYANFDREKQDWVLLKVNDEAGIRPDKIFLALANEIGGPSNRDFSEKDVRNYISSRLRFTNVNVDVKEMLDHFMRMKEMNPNFFYVVNVDDDYKFRSAVWVDARCRASYEYYGDVLDVNKCGCFYFRHGLPFATFVGVNHHGDSAWVKVEQEILAYEKTRYVTYNVHFDRLTHEEFVNGDDEAAMLHAALDDARVKLVDYRAKMRNKAVADAHTSIATEIFPVVATGDIQCPSKVTTKGRPKGKRLRYEMEKSIKQSMQRKRKNSDQISIDNRVESCENIDLDAPARQIGLQGVGGFMSLLNSFGNT 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01311 456 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 293 IPR031052 GO:0006355
Adu02g01311 456 Pfam FAR1 DNA-binding domain 88 168 IPR004330 -
Adu02g01311 456 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 57 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01311 Adu-Chr2 41157783 41161207 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu02g01311 FAR1 3.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01311 - - ahf:112757560 406.371