Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01272 ATGTTGTTCACATTGCTTCTATGTAACACACTGCAGGAGGAGATTTCAAGCCCAATCAACGCCCGAATCTTCGAACTCTGCGATGACGAGTTGTTCCCGGAGGCGGGTCTTCAGAGCTCTGAGGTTACCTCAACCTCAAACTGTTGCTTTGAAGAGGCACAATACAAGACCAATACAGTCACCACACCAACTAGTACAACACAAGATATAACTGCCTCGGCAGCGGCCGTTGCGGCCAATAACAATAACAACAAACCACCGGACAGCTGTAACAACCTTTCGGTTATCTTTGACTCCCAAGAAGACCTTGACAATGACATCTCTGCTTCCATAGACTTCTCTTCTTCTCCAGCCGCAGCTTTTCCAGTTCCATCTCTTCTCCCAAATATCACAACTCAGCCGGAACAATTTGACTTCTCCTCGCCTTCGGTTCTCAAGGGTCTCCCTCATCAGTATCCAACTGACACTGCTACTACTGTTGTTGTTCCACCACTTATGGGGAATCCATTAGTATCTTCTGTTTTCGAAGATGAATGCATGTCTTCAATGGCTTCTTATGTTCCTATTAACTCTTCTTCCGCACCTTCTTGCTCTTATCTCAGCCCTGCTGGCTTAGGAGTGTTCATGCCTCCTCTTACTACCGCCTTATCTGCTGATTCTGCCTTGTTTGGTGGCAACATTCTACTCGGTTCGGAACTTCAAGCTCAAGAAATCGATTACCAGGGAGAAAATGGTGGAATATTTTGTACAGATTCAATTCAGAGGGTGTTTAATCCACCAGATCTTCAGACACTTAGTAGTGAGAGTCAGCAACTTGTACCTGGTTCTGGAGGCTCTGCCACTTTGGCACCAGAAATCTCAAACTTGGAGGACTCTACCTTAAAAGTTGGTAAACTTTCTGTTGAGCAAAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCATGCCGCAAAACTCTGGCTGATAGCCGACCCCGAGTTCGAGGAAGGTTTGCAAAGAATGATGACTTCGGAGAGAACCATAGACCAGCTTGTAGCAATCATGAAGAAGATGATGAAGAAGAAATAGTTGTGAAGGAAGATGATGGTTTGGTCGATTCCTCAGATATCTTTGCACATATAAGTGGTGTGAACTCCTTCAAGTGCAACTATTCTTCCATCCAATCCTGGATTTAA 1212 0.4414 MLFTLLLCNTLQEEISSPINARIFELCDDELFPEAGLQSSEVTSTSNCCFEEAQYKTNTVTTPTSTTQDITASAAAVAANNNNNKPPDSCNNLSVIFDSQEDLDNDISASIDFSSSPAAAFPVPSLLPNITTQPEQFDFSSPSVLKGLPHQYPTDTATTVVVPPLMGNPLVSSVFEDECMSSMASYVPINSSSAPSCSYLSPAGLGVFMPPLTTALSADSALFGGNILLGSELQAQEIDYQGENGGIFCTDSIQRVFNPPDLQTLSSESQQLVPGSGGSATLAPEISNLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGENHRPACSNHEEDDEEEIVVKEDDGLVDSSDIFAHISGVNSFKCNYSSIQSWI 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01272 403 PANTHER CCT MOTIF FAMILY PROTEIN 12 403 - -
Adu02g01272 403 MobiDBLite consensus disorder prediction 343 365 - -
Adu02g01272 403 MobiDBLite consensus disorder prediction 343 361 - -
Adu02g01272 403 ProSiteProfiles CCT domain profile. 304 346 IPR010402 GO:0005515
Adu02g01272 403 Pfam CCT motif 304 346 IPR010402 GO:0005515
Adu02g01272 403 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 12 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01272 Adu-Chr2 37804238 37808090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01272 283 353 C2C2-CO-like Transcription Factor Family AT5G24930 39.437 1.97e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu02g01272 CCT 5.2e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01272 - - lja:Lj6g3v0082150.1 468.003