Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01255 ATGAAAGGAATATCCTATCGGGGTAATTATATTTGCTTCGGAAGATATGCTCTTCAAGCACTTGAACCCGCTTGGATCACATCTAGACAAATAGAAGCAGGTCGGCAGGCAATGTCACGAAATGTCCGCCGAGCCAATAACAGCGGAGCCCACCAATTGATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTCGTAAAGAACTTAAACATAGCAATGGCATGATAATACAGTATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCACCCGGGAATTGAGACAGATAAATTTAACTAAAATAGTTTCATTAGCACCTGAGGGCGTTATTCATGTTCAAGCTAATTTCAACAATACCATGGTCATTGTTACCGATGTACGGGGTCAGGTAATTTCGTGGTCCTCCGCAGGTACTTGTGGATTCAAAGGTACACGAAGGGGAACACCATTTGCCGCCCAAACCGCAGCAGGAAATATTATTCGAACAATAGCGAATCAAGGCATGCAACGAGCTGAAGTCATGATAAAGGGTCCCGGTCTCGGAAAAGATACGGTATTAAGAACTATTCGTAGAAGTGGCATACTCTTAAATTTTATACGGGATGTAACCCCTATGCCACATAATGGGTGTAGGTCCCCTAAAAAATGA 789 0.4208 MKGISYRGNYICFGRYALQALEPAWITSRQIEAGRQAMSRNVRRANNSGAHQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTRKELKHSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAITRELRQINLTKIVSLAPEGVIHVQANFNNTMVIVTDVRGQVISWSSAGTCGFKGTRRGTPFAAQTAAGNIIRTIANQGMQRAEVMIKGPGLGKDTVLRTIRRSGILLNFIRDVTPMPHNGCRSPKK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01255 262 PANTHER 30S RIBOSOMAL PROTEIN S11, CHLOROPLASTIC 141 262 - -
Adu02g01255 262 Pfam Ribosomal protein L14p/L23e 42 154 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 Hamap 30S ribosomal protein S11 [rpsK]. 88 262 IPR001971 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 141 262 IPR001971 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 Pfam Ribosomal protein L16p/L10e 2 53 IPR016180 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 Pfam Ribosomal protein S11 155 262 IPR001971 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 ProSitePatterns Ribosomal protein L14 signature. 94 120 IPR019972 -
Adu02g01255 262 Hamap 50S ribosomal protein L14 [rplN]. 34 157 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 SUPERFAMILY Ribosomal protein L14 42 154 IPR036853 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 Gene3D Ribosomal protein L14 26 154 IPR036853 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 SMART Ribosomal_L14_2 34 156 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 SUPERFAMILY Translational machinery components 153 262 - -
Adu02g01255 262 PRINTS Ribosomal protein L16 signature 8 20 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu02g01255 262 PRINTS Ribosomal protein L16 signature 26 37 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu02g01255 262 Gene3D Ribosomal protein S11 155 262 IPR036967 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 SUPERFAMILY Ribosomal protein L16p/L10e 1 45 IPR036920 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 CDD Ribosomal_L16_L10e 7 46 IPR016180 GO:0003735|GO:0005840|GO:0006412
Adu02g01255 262 TIGRFAM rplN_bact: ribosomal protein uL14 42 154 IPR005745 GO:0003735|GO:0006412|GO:0015934
Adu02g01255 262 ProSitePatterns Ribosomal protein S11 signature. 233 255 IPR018102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01255 Adu-Chr2 35147779 35151012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01255 45 143 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.951 5.49e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01255 K02948 K02874 pop:112323782 285.034