Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01238 ATGTATCACTTCTTATTCCTAGAACACAACtgttcataccctgggtcgagctatcctacccgggatGAGTTCCAATACTTCTATGATGAGCATAGCATTACCATAGACATCGAAGGCAACTACACAACCAATAGCACCTACCATACCAACCTCAACACTCTTACGTCAAATATTCTCAACAACAAAGAAATCGATTACGGTTTCTACAACGTCTCATACGGCGAGTACCCAAACAGAGTGTACACCATTGGACTATATAGAGGAGACATTAAGCAGGAGCAGTGCCGAACTTGCCTAAACCAATCCAAAGCCAATCTCACGGCGGTTTGTCCGAATCGCAAGGTAGCGATCGGGTGGTACAACGATGAACTATGCATGCTGCGATACTTGAATCGCAGCATATTCGACTGGATGGACAATGGACCGGCTTATTACAAGAAAAGCGAAAAAAACGCCATGGATTTGAATGAGTTCAATACAAAATTGAACGATTTGTTGAATGGCTTGAAAAGCAAAGCTTCTTCTGGTGACTCTCGGTTAAAGGGCCAACAGCGTATACGCCACATTCGCCGCCAGCATCTTCGCCGCCCACCACCACCTCTGAAAAAGCCACACTTCAGTACTAGTCATCGCCATAACAGTACCTATAGTGGCTGTGATTATGTTCATGTTTATTTTTATCCACAGCAGGATGATAACACTGAAGATATGAAAATTGTTGAGTCATTACAATTTAACTTGGAGTGTATACGAGACGCTACAAATGACTTTTCTGATGCTAATAAGCTTGGACAAGGTGGATTTGGGGTTGTTTACAAGGGTATTCTCACTAATGGACAAGAGATTGCTGTAAAAAGGTTGGCAAGGAGTTCTGATCAAGGAGACCTAGAATTTAAGAATGAAGTGTTGTTACTGGCTAAGCTTCAACATCGAAATTTAGTTAGCCTACTTGGTTTTTGTTTGGAAGGAAGAGAAAGTTTTGGTATATTAGTTCTTGAGATTGTAAGTGGCAAGAAAAGCAGTGGCAATTGTCAGAGTGAGAATCCAGAGACTCTCATGAACTTTGCATGGAGAAATTGGAAGGATGGGACAATTTCAAACATTGTAGATACCACATTAAGAAATAGTTCACAGAATGAAATAATGAGATTCATCCGCATTGCTTTACTATGTGTTCAAGCAAATGAAGCTGATAGACCAACCACGGCTACAGTTTTACTCATGCTTTATAATCATTCGATCACATTCGCAGTACTATCAAAACCTGCATTTTTGCTGAATACAGGATCAAACACATCGACAAAAGGACCAGCACATGAATCAGTCAATGAAGCCTCAATTACTGATCCGTATCCTCGCTAG 1362 0.3965 MYHFLFLEHNCSYPGSSYPTRDEFQYFYDEHSITIDIEGNYTTNSTYHTNLNTLTSNILNNKEIDYGFYNVSYGEYPNRVYTIGLYRGDIKQEQCRTCLNQSKANLTAVCPNRKVAIGWYNDELCMLRYLNRSIFDWMDNGPAYYKKSEKNAMDLNEFNTKLNDLLNGLKSKASSGDSRLKGQQRIRHIRRQHLRRPPPPLKKPHFSTSHRHNSTYSGCDYVHVYFYPQQDDNTEDMKIVESLQFNLECIRDATNDFSDANKLGQGGFGVVYKGILTNGQEIAVKRLARSSDQGDLEFKNEVLLLAKLQHRNLVSLLGFCLEGRESFGILVLEIVSGKKSSGNCQSENPETLMNFAWRNWKDGTISNIVDTTLRNSSQNEIMRFIRIALLCVQANEADRPTTATVLLMLYNHSITFAVLSKPAFLLNTGSNTSTKGPAHESVNEASITDPYPR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01238 453 Gene3D Phosphorylase Kinase; domain 1 224 329 - -
Adu02g01238 453 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 230 325 - -
Adu02g01238 453 Gene3D - 32 133 IPR038408 -
Adu02g01238 453 ProSiteProfiles Protein kinase domain profile. 257 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01238 453 SUPERFAMILY Protein kinase-like (PK-like) 233 337 IPR011009 -
Adu02g01238 453 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 326 431 - -
Adu02g01238 453 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 230 325 - -
Adu02g01238 453 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 35 181 - -
Adu02g01238 453 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 326 431 - -
Adu02g01238 453 SUPERFAMILY Protein kinase-like (PK-like) 326 434 IPR011009 -
Adu02g01238 453 Gene3D Transferase(Phosphotransferase) domain 1 330 418 - -
Adu02g01238 453 Pfam Protein kinase domain 258 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01238 453 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Adu02g01238 453 MobiDBLite consensus disorder prediction 431 453 - -
Adu02g01238 453 ProSitePatterns Protein kinases ATP-binding region signature. 263 285 IPR017441 GO:0005524
Adu02g01238 453 Pfam Salt stress response/antifungal 39 131 IPR002902 -
Adu02g01238 453 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 35 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01238 Adu-Chr2 32921431 32925662 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01238 326 448 Receptor kinase-like Gene Family AT4G11460 37.795 1.15e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu02g01238 Pkinase 9.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01238 - - ahf:112705482 304.679