Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01228 ATGGTTAAATCATGCTGGAAACCATTGGTGGAAGGCGAAGATAATGGAGACGGCGGTGGGAGTAGTAGTGGGAGAGTTGATGGGTTGTTGTGGTACAAAGATTTGGGGTACCATCTTCATGGTGAATTCTCAATGGCTGTGATTCAAGCAAATAACTCATTGGAAGATAGAAGCCAAGTTGAATCTGGACCTTTGAGTTCCAACCACCATTTGGGTCCTCATGGAACCTTCATAGGTGTATATGATGGTCATGGTGGAAATGAAGCCTCACAGTTTGTTAGTGACAATCTTTTCTCTAATCTCAAGAGGTTTGCAGCTGAAAATCAAAGCATATCAGAAACCGTTATAAAAAAAGCATTCTCAGCAACAGAGGATGGTTTTTTGTCTCGAGTTAAGAAACAATGGCTAAGTAAGCCGGAGATTGCATCCACAGGAAGTTGTTGCTTGGTTGGAATAATCTGCAACGGCATGCTTTACATCGCAAACTCCGGCGACTCGAGGGCGGTGCTAGGTAGATTAGAGAGACAAACAAGAGAAGCATCTGCTGTTCAATTATCCGTCGAACATAATGTTAATCAAGAAACTGTTAGAGATGAACTTCGTTCAAAGCACCCCTTTGATTCACAGATTGTGGTTATGAGACACAATGTTTGGCGTGTAAAAGGACTCATACAGGTTTCAAGATCCATTGGTGATGCATATCTGAAGAGAGCAGAGTTCAATAGAGATCCTCTGCCATCTAAGTACAGACTAGCTGAGACATTCTTCAAGCCAATTCTTAGTTGTGAGCCATCAATATCGGTGCACAAACTCCACCCTGATGACCAATTCCTCATATTTGCTTCTGATGGTTTATGGGAGCACCTTGGCAACCAAGAAGCTGTTAGCATAGTCAGCAACAACCCACCTAATGGAATTGCAAGAAGACTAGTGAAAGCTGCACTAAGAGAAGCAGCAAAGAAGAGAGAAATGAGATTTGCAGACCTCCAAAAGATTGAACAAGGAGTAAGGAGACATTTTCATGATGACATAACCGTGATTGTTGTGTTTCTCAATCCCAAACTTATTGATACAAGCTCTCTATTAGGTTCTCCTCTTTCAATCAAGGGAGGCGAATTTTAA 1122 0.4189 MVKSCWKPLVEGEDNGDGGGSSSGRVDGLLWYKDLGYHLHGEFSMAVIQANNSLEDRSQVESGPLSSNHHLGPHGTFIGVYDGHGGNEASQFVSDNLFSNLKRFAAENQSISETVIKKAFSATEDGFLSRVKKQWLSKPEIASTGSCCLVGIICNGMLYIANSGDSRAVLGRLERQTREASAVQLSVEHNVNQETVRDELRSKHPFDSQIVVMRHNVWRVKGLIQVSRSIGDAYLKRAEFNRDPLPSKYRLAETFFKPILSCEPSISVHKLHPDDQFLIFASDGLWEHLGNQEAVSIVSNNPPNGIARRLVKAALREAAKKREMRFADLQKIEQGVRRHFHDDITVIVVFLNPKLIDTSSLLGSPLSIKGGEF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01228 373 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Adu02g01228 373 ProSiteProfiles PPM-type phosphatase domain profile. 39 351 IPR001932 -
Adu02g01228 373 SMART PP2C_4 34 349 IPR001932 -
Adu02g01228 373 CDD PP2Cc 43 351 IPR001932 -
Adu02g01228 373 Pfam Protein phosphatase 2C 70 320 IPR001932 -
Adu02g01228 373 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 371 - -
Adu02g01228 373 SUPERFAMILY PP2C-like 49 352 IPR036457 -
Adu02g01228 373 Gene3D - 35 359 IPR036457 -
Adu02g01228 373 PANTHER ALPHABET, ISOFORM E-RELATED 3 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01228 Adu-Chr2 32275337 32279409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01228 1 371 PP2C-type Phosphatase Gene Family AT3G55050 63.342 9.45e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01228 K01102 - gmx:100814123 601.668