Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01222 ATGGGTTGGATTCCATGTTCTGGAAATTCAAATGCTAAGAAGAAGGTGAAGAAGAAGATGGAAGTGGAGGAAAGTGTGAAGCCTGATCCAATCAAAGGGAAATTGAAGAGGAACTCGTCCATTAATTCGGCAGATTCATCTAAAAATGGGAATACTGATCACATTGCTGCACAGACATTCTCCTTCCGTGAGTTGGCAACTGCAACTCGACATTTTCGGGCAGAATGTCTTTTGGGTGAGGGAGGCTTTGGTAGAGTATACAAGGGGCGTTTGGAAAGTATTAATCAGATTGTTGCAATTAAACAACTTGACCGAAATGGCCTGCAAGGGAATAGAGAGTTCCTAGTTGAAGTGTTGATGTTAAGTCTTCTTCATCACCCGAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGACTTCTCGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATGTTGCTCCTGGCAAGGAACGACTAGATTGGAACACACGAATGAAAATAGCTGCCGGAGCAGCAAGCGGATTGGAATATCTTCATGACAAAGCTAACCCTCCTGTTATATACCGAGATTTAAAGTGCTCCAATATTTTGCTCAGTGAAGGGTATCATCCCAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAAAACACCCATGTATCAACGAGGGTTATGGGCACCTACGGATATTGTGCTCCCGAGTATGCAATGACAGGTCAGCTGACTCTGAAATCAGATGTTTATAGCTTCGGTGTAGTTCTTCTGGAAATCATTACAGGAAGGAAGGCAATTGACAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAGGACCGAAGAAAATTTGCGCAAATGGCCGATCCAATGCTTCAAGGTCAATATCCTCCAAGAGGACTCTACCAGGCCCTTGCTGTGGCGGCAATGTGTGTTCAGGAGCAGGCCAACATGCGTCCAGTTATAGCCGATGTTGTTACAGCTTTGAGTTACCTTGCTTCCCAAAGATATGACCCGCATACACAAACAGCACAAAATTCTCGCTTCGCTCCTGGCACTCCTCCTAGAACCAAGAGGGGACACTGA 1137 0.4433 MGWIPCSGNSNAKKKVKKKMEVEESVKPDPIKGKLKRNSSINSADSSKNGNTDHIAAQTFSFRELATATRHFRAECLLGEGGFGRVYKGRLESINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDVAPGKERLDWNTRMKIAAGAASGLEYLHDKANPPVIYRDLKCSNILLSEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFAQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPHTQTAQNSRFAPGTPPRTKRGH 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01222 378 MobiDBLite consensus disorder prediction 36 52 - -
Adu02g01222 378 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Adu02g01222 378 MobiDBLite consensus disorder prediction 1 52 - -
Adu02g01222 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Adu02g01222 378 SMART serkin_6 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01222 378 CDD STKc_IRAK 78 346 - -
Adu02g01222 378 MobiDBLite consensus disorder prediction 356 378 - -
Adu02g01222 378 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Adu02g01222 378 Gene3D Transferase(Phosphotransferase) domain 1 149 367 - -
Adu02g01222 378 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 376 - -
Adu02g01222 378 Pfam Protein tyrosine and serine/threonine kinase 76 345 IPR001245 GO:0004672|GO:0006468
Adu02g01222 378 SUPERFAMILY Protein kinase-like (PK-like) 54 346 IPR011009 -
Adu02g01222 378 ProSiteProfiles Protein kinase domain profile. 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01222 378 MobiDBLite consensus disorder prediction 14 34 - -
Adu02g01222 378 PANTHER OS07G0668900 PROTEIN 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01222 Adu-Chr2 31366565 31370698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01222 52 351 Glycoside Hydrolase AT3G07070 72.000 1.26e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Adu02g01222 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01222 - - gmx:100776041 683.33