Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01200 ATGATACCTCTACCGTGCGACTACTGCGACTCCAAAATGGCAATTATCTTTTGCCGCGCTGACTCTGCCAAGCTCTGCATCTCATGTGACCAGCACGTGCACTCTGCCAACGCCCTCTCACTCAAGCACGTGCGCTCTCAGATTTACGATAACTGCCGCAACGAACCTGTCGCCGTGCGATGCGCCACTGACAATCTCATTCTCTACAACGACTGCGACTCCGACGCACATAACAGTTCCTCCGTCACCTCATCCCTCCATGCCTGCCACCTCCTCCATGGCTTCTCAGGCTGTCCTCCCCCCTTGAAATCCCCGCCGCCTTAG 324 0.5617 MIPLPCDYCDSKMAIIFCRADSAKLCISCDQHVHSANALSLKHVRSQIYDNCRNEPVAVRCATDNLILYNDCDSDAHNSSSVTSSLHACHLLHGFSGCPPPLKSPPP 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01200 107 CDD Bbox1_BBX-like 5 48 - -
Adu02g01200 107 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED 4 102 - -
Adu02g01200 107 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 102 - -
Adu02g01200 107 SMART bboxneu5 1 48 IPR000315 GO:0008270
Adu02g01200 107 Pfam B-box zinc finger 5 46 IPR000315 GO:0008270
Adu02g01200 107 ProSiteProfiles Zinc finger B-box type profile. 6 48 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01200 Adu-Chr2 29415746 29416069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01200 4 103 C2C2-CO-like Transcription Factor Family AT1G28050 61.000 2.28e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu02g01200 zf-B_box 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01200 - - ahf:112697135 186.422