Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01188 ATGCCCAGCTGGAGCACCAAGGATTTGTTAGTAGTTCTTGCTTTGGCAGTTACGGTCTCGAGCTTATTGAATGGGGTGAAGTGCCAGCAAACGAGTGACCTTGACAACCCTGCTGTTCTCTCTGTTTTGACACAGCTTGTTTACAGCCAAGTCTCCAACGTCACCTCTTTCCTCAGTCACGAAATTAGCAACCGCTCCAGTTTCTGCGTCGAAGATCTGAATGCTGATTGGAATAATGCATTTAACTTTTCATCCGACTTGGGCTTCTTGACTTCTTGCATTCAAACGACGAAAGGGGACATAAAGCAACGCATATGTAATGAAGCAGAAATAAAGTTTTACTCAAAAAGTTTATTGGATAGATCTAATGGTATTAACTATTTGAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTATCTGGTTGTGAGCCAGGATGGGCCTGTAGTGCTCCCTCGACCGAGCAGGCTGAATTCCAAAATTCACAGGATATGCCTTCAAGAACTACTGACTGTGAACCATGTTGTGAAGGTTTCTTTTGCCCTCATGGTATCACATGCATGATACCTTGCCCTCTTGGATCCTATTGTCCTCTTGCAAAACTCAATAACACAACTGGTGTATGTGAACCATATCGTTATCAATTGCCTCCAATGCGGCCAAACCATACCTGTGGAGGTGCAAATATCTGGGCTGATGTTGATAGCAGTAGTGAGACATTCTGTCCAGCAGGATGGTATTGCCCAACAACTACAAAACGTATTCCTTGCAGTAGTGGGCATTACTGTAGGATGGGTTCTATATCTCAGACGAGATGCTTCAAGTTGACTTCATGTAAATCGAAAGCTGAGACCCAAAACATGGGTGTGTACGGAATTATGCTCATTGCTGCTTTGAGTACATTGCTGCTTATCATTTACAGCTGTTCTGATCAAGTTCTCAGTACTAGGGAAAGGAGAATGGCGAAGTCCAGAGAAGCAGCAGCTAGATCTGTAAGGAAGACTTCAAATGCACGACAAAGATGGAAAACTGCAAAAGACGTTGCTAAAAAGAGTGCAAGTGGACTACAAGCTCAACTATCACGAACATTTTCGCGTAAGAAGGACGTGGCAGATCCAGAAAAAGTTAAGATGTTGGGTCAAGCAACTGCAGAAACTGATATAGAATTGCTTTCACATTCACACCCTATTACTCCAAACATTGCTCCCAGCTCATCAGCTGTGCAAAAAGAAAAGGCTAAAGAATCCATTGATCCAATGCAGATGATGCATGAAATTGAAAATGGCGATAACCTTCACTTAGAAACTAAAACTAGAGATAAAAGTGTTCAAGGCAAAGCTTCTAAGGAAAAGCAACCTGAAACTCATAGCCAGATTTTTAAGTATGCATATGCTCAATTGGAGAAGGAGAAGGCACAGCAACAAGAAAACAAGAATCTTACTTTCTCAGGAGTAGTTAACATGGCTACCAAAGGTGAACCAAGGAAACGGCTGTTAATGGAAATTTCTTTCAAAGATCTAACTCTCATTTTGAAGGTGCAAAACAAACTTATATTGAGATGTGTAACGGGGAAAATTAAACCTGGGCGCATTACTGCTGTCATGGGTCCATCAGGGGCCGGTAAGACAACATTTCTTTCAGCAGTAGCTGGAAAAGCATTTGGATGCAAGATGACTGGTTCAGTTCTTATAAATGGAAAGACTGAATCAATCCATTCCTATAAGAAAATTATTGGTTTTGTGCCACAAGATGACATAGTTCATGGAAATCTGACAGTAGAAGAGAATTTATGGTTCAGTGCACAGTGCAGGCTATCTGCTGACTTGCCGAAAGCAGACAAAGTTCTGGTTGTAGAAAGAGTTATTGAATTCTTGGGCCTTCAATCTGTGCGGAATTCTTTGGTTGGAACTGTAGAAAAACGAGGGATTTCCGGTGGCCAAAGGAAGCGTGTAAATGTTGGACTGGAAATGGTCATGGAACCTTCACTTTTATTGTTAGATGAACCCACATCTGGTTTGGACAGTGCATCATGTCAGCTACTTCTTAGAGCATTAAGACGGGAAGCTCTTCAAGGAGTGAACATATGCATGGTGGTTCACCAACCAAGCTATGCATTGTTCAATATGTTTGATGACTTGATACTTCTGGCGAAAGGAGGTCTTACTGTGTATCATGGACCTGTCAAGAAAGTTGAAGAATACTTTCTAGGACTTGGGATCTGTATTCCGGAGCGGATCAATCCTCCTGATTACTTTATCGACATTTTGGAGGGCTTAGTAGAACCTGGTGGAAGCTCGGGAGTCAGTTATAAAGACCTGCCAGTTAGATGGATGCTTCATAATGGATACCCAGTACCTCTTGATATGCAGAAGAATGCAGCGAAATTTGGTAACTTAACTCCAAATCCAGCTAACGAAACTGATCCCAATGGCTCTGAACATGACGACAGAAGCTTTGCCGGAGAACTATTGCATGATGTTAGACACGTCGTGGAATTGGAGGGGGAGAAGATACTATTCAACTTTTTGAAATCCCAGGATTTATCTAACCGGAAAACTCCTGGGATATTCAAGCAATACAAGTACTTCCTTATACGGATTGTGAAGCAGCGACTAAGGGAGTCCAAAATCCAAGCTATAGATTATCTAATATTATTACTTGCTGGAGCTTGCTTAGGAGCGCTGAGTAGAGGAAATGATCAGAAGTTTGGTGGAGTTGGATACATCTATACAGTGATTTGTGTATCTCTTTTATGTAAAATTGCGGCCTTGAGATCATTTTCTCTGGATAAATTGCACTACTGGAGGGAGAGGGATTCTGGGATGAGCAGCTTGGCTTACTTTCTTTCTAGAGATACAGTGGATCATTTTAATACTCTGGTCAAGCCTGTGGTGTACCTCTCTATGTTCTATTTCTTCACCTATCCAAGATCAACTTTTGCAGATAATTACATTGTGCTGCTCTGTCTAGTATACTGTGTGACTGGAATAGCATATACATTGGCAATAGTATTCAAACCTGGCGCGGCACAGCTATGGTCAGTGCTTCTTCCAGTTGTTTTAACCCTTGTTGCAACACAAGCTAAAGACAGTAAATTTTTGAAGGTTGTAGCAAATTTATGTTACCCTAAGTGGGCTTTAGAAGCATTCGTAATCGCAAATGCTGAAAGGTACCATGGAGTGTGGATCATAAGTCGTTGTGGTTCACTAAAGAGAAGTGACTATAATATTCATGATTGGAGTTTGTGTGTTTCCATCCTAATTCTTATGGGTGTAACCGCTCGGGCAATAGCTTTATTCTCTATGCTTACCTTTCAAAAGAAGTGA 3327 0.4151 MPSWSTKDLLVVLALAVTVSSLLNGVKCQQTSDLDNPAVLSVLTQLVYSQVSNVTSFLSHEISNRSSFCVEDLNADWNNAFNFSSDLGFLTSCIQTTKGDIKQRICNEAEIKFYSKSLLDRSNGINYLKPNKNCNLTSWVSGCEPGWACSAPSTEQAEFQNSQDMPSRTTDCEPCCEGFFCPHGITCMIPCPLGSYCPLAKLNNTTGVCEPYRYQLPPMRPNHTCGGANIWADVDSSSETFCPAGWYCPTTTKRIPCSSGHYCRMGSISQTRCFKLTSCKSKAETQNMGVYGIMLIAALSTLLLIIYSCSDQVLSTRERRMAKSREAAARSVRKTSNARQRWKTAKDVAKKSASGLQAQLSRTFSRKKDVADPEKVKMLGQATAETDIELLSHSHPITPNIAPSSSAVQKEKAKESIDPMQMMHEIENGDNLHLETKTRDKSVQGKASKEKQPETHSQIFKYAYAQLEKEKAQQQENKNLTFSGVVNMATKGEPRKRLLMEISFKDLTLILKVQNKLILRCVTGKIKPGRITAVMGPSGAGKTTFLSAVAGKAFGCKMTGSVLINGKTESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSADLPKADKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLLLDEPTSGLDSASCQLLLRALRREALQGVNICMVVHQPSYALFNMFDDLILLAKGGLTVYHGPVKKVEEYFLGLGICIPERINPPDYFIDILEGLVEPGGSSGVSYKDLPVRWMLHNGYPVPLDMQKNAAKFGNLTPNPANETDPNGSEHDDRSFAGELLHDVRHVVELEGEKILFNFLKSQDLSNRKTPGIFKQYKYFLIRIVKQRLRESKIQAIDYLILLLAGACLGALSRGNDQKFGGVGYIYTVICVSLLCKIAALRSFSLDKLHYWRERDSGMSSLAYFLSRDTVDHFNTLVKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYTLAIVFKPGAAQLWSVLLPVVLTLVATQAKDSKFLKVVANLCYPKWALEAFVIANAERYHGVWIISRCGSLKRSDYNIHDWSLCVSILILMGVTARAIALFSMLTFQKK 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01188 1108 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 1105 - -
Adu02g01188 1108 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 33 1105 - -
Adu02g01188 1108 Gene3D - 500 735 IPR027417 -
Adu02g01188 1108 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 502 743 IPR003439 GO:0005524
Adu02g01188 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 733 IPR027417 -
Adu02g01188 1108 Pfam ABC transporter 521 671 IPR003439 GO:0005524
Adu02g01188 1108 Pfam ABC-2 type transporter 700 1108 IPR043926 GO:0140359
Adu02g01188 1108 MobiDBLite consensus disorder prediction 432 455 - -
Adu02g01188 1108 SMART AAA_5 528 720 IPR003593 -
Adu02g01188 1108 MobiDBLite consensus disorder prediction 326 348 - -
Adu02g01188 1108 ProSitePatterns ABC transporters family signature. 643 657 IPR017871 GO:0005524
Adu02g01188 1108 CDD ABCG_EPDR 500 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01188 Adu-Chr2 28795294 28805589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01188 526 732 Calmodulin-binding Proteins AT2G36910 27.876 5.74e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01188 - - gmx:100783798 1700.64