Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01183 ATGCAAAAGAGAAGGTTGTTACTTGTTAGTGGATTAGCAACTTATTTGGCAGGGTGGGACTGTTTCGGCTATGACATTAGATATGGGAATACTTCTTGGGGATCCGCAATTGGATTCAAGTTGGATAGTCTTTTAAAGCTTACTGACACTTGTGCTTCTAACAATAAGATGACACTGATGCACTATATTTGCAAGTTGGGAGCTCCTGAGATTGTTCCAGATTATCCAATTCTTTCTGTTGACGACCTAGCAGATCAAATAGCCGAGGTTTTCAACTTTTTTGGTCTTAGTGCAGTAATGTGCATAGGAGTAGCTGCCGGGGCTTACATTCTTACCTTATTTGCTTTAGCTTATAACTTCTCACTGCTCCAGCTCTTCCGTGGCGACACTATCCTCATCAAGGGCAAGAAAAGGAAGGATACTGTTTGCATAGCTCTTGCTGATGACACCTGTGAAGAGCCCAAGATCAGGATGAACAAAGTTGTGAGGTCGAATTTGCGGGTTCGTCTTGGAGATGTTGTGTCCATGCACCAGTTCTCTGATGTGAAGTATGGGAAACATGTGCACATTCTGCCTATTGATGATACCATTGAAGGTGTCACTGGCAATCTGTTTGATGCTTTCTTGAAACCTTACTTCTTGGAAGCTTATCGTCTTGTCAGAAAAGGAGATCTATTTCTTGTCCATGGAGGGATGAGAAGTGTGGAGTTTAAGGATGAAGAGAGGCTGGATGAAGTTGGATATGATGATGTGGGTGGAGTCAGGAAACAAATGGCACAAATTCGTGAGTTGGTAGAGCTTCCCTTGAGGCATCCACAACTCTTTAAGTCGATTGGTGTGAAACCACCCAAAGGTATTCTACTTTATGGACCCCCTGGTTCCGGGAAGACAGTGATAGCAAGAGCTGTTGCTAATGAAACGGGAGCTTTCTTCTTTTATATAAATGGACCGGAGATTATGTCCAAACTGGTAGGAGAGAGTGAAAGCAATATGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTCATTGATGAAATCGATTCTATTGCACCCAAGAGGGAGAAGACACATGCTACCAATCGCCCAAACAGCATTGACCCAGCATTGAGAAGGTTCGGTAGATTTGATAGGGAAATTGATATTGGTGTTCCTGATGAAGTTGGCCGACTTGAAGTTCTTCGTATACACACTAAAAACATGAAGCTCTCTGATGATGTAAGTTTCATTGTCTCTTAA 1251 0.4253 MQKRRLLLVSGLATYLAGWDCFGYDIRYGNTSWGSAIGFKLDSLLKLTDTCASNNKMTLMHYICKLGAPEIVPDYPILSVDDLADQIAEVFNFFGLSAVMCIGVAAGAYILTLFALAYNFSLLQLFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSMHQFSDVKYGKHVHILPIDDTIEGVTGNLFDAFLKPYFLEAYRLVRKGDLFLVHGGMRSVEFKDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTVIARAVANETGAFFFYINGPEIMSKLVGESESNMRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVSFIVS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01183 416 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 363 412 - -
Adu02g01183 416 PANTHER AAA-FAMILY ATPASE 363 412 - -
Adu02g01183 416 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 119 238 - -
Adu02g01183 416 SUPERFAMILY alpha/beta-Hydrolases 12 119 IPR029058 -
Adu02g01183 416 SUPERFAMILY Formin homology 2 domain (FH2 domain) 30 66 - -
Adu02g01183 416 SMART CDC48_N_2 102 182 IPR003338 -
Adu02g01183 416 Pfam Cell division protein 48 (CDC48), N-terminal domain 120 179 IPR003338 -
Adu02g01183 416 Gene3D - 389 413 - -
Adu02g01183 416 Gene3D - 118 181 - -
Adu02g01183 416 Gene3D Formin, FH2 domain 26 95 IPR042201 -
Adu02g01183 416 Pfam Ndr family 66 124 IPR004142 -
Adu02g01183 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 411 IPR027417 -
Adu02g01183 416 Pfam Formin Homology 2 Domain 32 66 IPR015425 -
Adu02g01183 416 Pfam ATPase family associated with various cellular activities (AAA) 286 359 IPR003959 GO:0005524|GO:0016887
Adu02g01183 416 Gene3D - 182 245 - -
Adu02g01183 416 Gene3D - 246 362 IPR027417 -
Adu02g01183 416 Gene3D - 363 388 IPR027417 -
Adu02g01183 416 SUPERFAMILY Cdc48 domain 2-like 181 238 IPR029067 -
Adu02g01183 416 SMART AAA_5 282 390 IPR003593 -
Adu02g01183 416 CDD AAA 252 387 - -
Adu02g01183 416 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 239 362 - -
Adu02g01183 416 PANTHER AAA-FAMILY ATPASE 239 362 - -
Adu02g01183 416 PANTHER AAA-FAMILY ATPASE 119 238 - -
Adu02g01183 416 SUPERFAMILY ADC-like 122 178 IPR009010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01183 Adu-Chr2 28327074 28330577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01183 245 411 Calmodulin-binding Proteins AT3G56690 43.147 6.99e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01183 K13525 - aip:107621123 642.499