Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01156 ATGCTGCTGGAGCTACGTCGGGCGAGAGATTTCTATGAGATATTGTTAGATGAGAACAGGTGGAAGGGTTTCACGCAGAGCAATGCGAAGATCAGCAAAGAGGTTGGTGGAGAGTTCAGCATCTTCGGTGGTTCTATTACCGGAACCAACGTGGAGTTGAAGGAAGCTAAGTTGATCATTCAGAAATGGAGGTTTGGAAGCTGGCCTGATGGTGTTCATTCTTTGGAGGAGCCTGAACCTGGGGTTACTGTTGTCAAGCTCACACATAATGATGTTCCTGAAGAAGATAAGTATGGAAATGCCACTGTGGTGGAGAACACGGAGAGAGGGTGGAGGGATCTCATCTTCCAAAGGATACTAATTAAACTCAGGTTTACAGAGACTACACGTGCTAGAATAGAGAAGACTGGTGGTGAACGCTTGACATTTGATCAACTTGCACTTAGAGCACCTCTTGGACAGAACATGGTCCTTTTTAGAGGTCCAAAGAACTCCAGAAAAGTTGTGAAACACTTTGGTCCTGCTCTTGGTGTTCCTCACAGCCATACCAAGCCTTATGTATGA 564 0.4574 MLLELRRARDFYEILLDENRWKGFTQSNAKISKEVGGEFSIFGGSITGTNVELKEAKLIIQKWRFGSWPDGVHSLEEPEPGVTVVKLTHNDVPEEDKYGNATVVENTERGWRDLIFQRILIKLRFTETTRARIEKTGGERLTFDQLALRAPLGQNMVLFRGPKNSRKVVKHFGPALGVPHSHTKPYV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01156 187 Gene3D - 120 187 - -
Adu02g01156 187 Pfam Ribosomal protein 60S L18 and 50S L18e 122 187 IPR021131 -
Adu02g01156 187 Gene3D - 8 119 IPR023393 -
Adu02g01156 187 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 7 119 IPR039981 GO:0001671|GO:0051879
Adu02g01156 187 SUPERFAMILY Bet v1-like 12 118 - -
Adu02g01156 187 CDD SRPBCC_Aha1 7 119 - -
Adu02g01156 187 Pfam Activator of Hsp90 ATPase homolog 1-like protein 12 114 IPR013538 -
Adu02g01156 187 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 7 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01156 Adu-Chr2 25164500 25167162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01156 123 187 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 84.615 7.19e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01156 - - jre:109011939 205.682