Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01148 ATGGGCGGGGGACCGAGGACGTACCCGGGCGGGGTCTCCAAGTGGCAGTGGAAGCGCATGCAGGCCAAGAAGGCCAAGAAGGCCAAGCAGCTCCTCAAAGCCCGCCTCTCCCGCGAGCGTCACATTTATGAGATGCGCAAGCGGGCCGAGCTCCGGGCTGCCGTCTCCGACCTCGAGAGACCCTGGGAGCCCGTCCAGCAGGCCCCCGCCTTGTTCTCTGTGCGGGCCGACGAGCAGGTCAAGGTCCTCGCCGACAGGTTCCAAAGACCTGGTGGGTTTGACCTCTGGAGCGAGAAGGACGGGCCTCAGTTGTTTGAAACTCCTGATGAGTTGCCATCTGCAAGGTTCTTCCCCAAAGGGGTTGTTCATAGTATCAGGCCTTATAGGAGGATTGATGCTGATGAGTTGCTGGGGAAGGGTAGTGGGGAGTGTTCTTCAGCTTTGTTGAGCTCTTCAGAGAATAATGGGGTGAGTGTTGATGGTGGATTGAAGAATAATGGGAGGAATGGACAGAGGCTTTTGTCTGAGCATGTTGACAATGAAGGGTTTTCTTCTTCTCCTTTGGATTATGGGAGGAAGGGAGTGAATTCTGGCAGCCAAATGAGGAAGAATAGGAATGGAAGCAGGCTTATGCCAGAGGGTGGTCGTGATGGGTTTGATAACGAAGTGTGTTCTTCTTCTTCTCCTTTGAGTTATGGAAGAAGTGGTGGGAATTATGATGGTAGAATGAGAAGGAATACGAATGGAAGGAGGCCTTTTTCAAAGGATGATGATTATGGATCTGATGATGGAGAGTATTCCTTTTCTCCTTTCAATTCTGAGAGGAATGGAGTTGACGGCAGAATGAGGAAGAATGGGAATGGAAGGAGGTTTCCATCAAGGGATGTTAGTGGGTCTGATGATGGAGAGTATCCCTCTTCTCCTTTCAGTTCTGAGAGGAATGGAGGGACTGTTGATGGCAGAATGAGGAAGAATGGGAATGGAAGGAGGTTGGCGTCCAGGGATGTTAATGGGTCTAATGGGTCTTACTCTGGTCGAGTTGGTTCTGGTATGAGGCAGGGTCGGGGTAATCCTAGCGCCAACAGAAGAGGATGGAAGTTACGGGTTTCCCAGGAAGAAAGAAATTCGCCACTCGAATTCCCCATAAAACAACTTGGTACCTATGTTCCACCCTCAAATTTTGCACTCAACCACAATCTCAATCATGTTTACAAGCAATTGAAGTTGACAAGCTCATACCCCTGTTCCACTTTCAAATTGTGCACTCAACCCAAACCATCTTTGGAGTCAAAGCAAATTGATGTGGAAACCATTACCAGAATCATCAATGACCACCCTTTCCCTGACCAATCCCTCCGCCCCACACTGCTACATCACCTCCCTCCTTCCACCATCACCACCCGGCTTATCGAAAATGTCCTTGGTCACCTCTTTGCTTCACATTGCAATGGTCTCAAGGCTCTTGAGTTCTTTAACTTCACCCTCCACCACTCCTACTCTCGCCTCAGTCCTGATTCCTTGGAGAAGACCCTCCATATTCTTACTAGGATGAGGTATTTTGAGAAAGCTTGGAGCTTGTTGAAAGAAATTGGGAGAACTCATCCTTCACTCCTCACACTCAAGTCCATGAGCATTATGTTGACCAAAATTGCCAAATTTCAATCCGTTGACGACACCCTTGAAGCTTTTAGGAGGATGGAGCATGATGTGTTTGTAGGGAAGGTGTTTGGAACTGATGAGTTTAATGTGCTTCTGAAAGCGTTTTGCACTCAGAGGCAGATGAAGGAGGCTAGATCTGTGTTTGTGAAGATGGTGCCAAGGTTTTCTGCGAATACTAAGACCATGAACATTTTGCTGTTGGGGTTCAAGGAATCAGGTGATGTTACCTCTGTTGAGCTCTTCTATCATGAAATGGTTAAGAGGGGTTTTAATCCTGATGGTGTGACTTATAATATTAGGATTGATGCTTACTGCAAGAAAGCTTGTTTAGGTGATGCTTTGAGGGTTTTGGATGAGATGGAGCAGAGGGGTTTTGTCCCTACAATCGAGAGTATAACCACATTAATTCATGGAACAGGATTGGTTCGAAACAAAGGAAAGGCATGGCAATTGTTCAACGAGATTCCGTCTAGGAACTTGGTTGTGGATACTGGTGCCTATAATGCTCTGATTAGTACATTGGTTTGA 2187 0.476 MGGGPRTYPGGVSKWQWKRMQAKKAKKAKQLLKARLSRERHIYEMRKRAELRAAVSDLERPWEPVQQAPALFSVRADEQVKVLADRFQRPGGFDLWSEKDGPQLFETPDELPSARFFPKGVVHSIRPYRRIDADELLGKGSGECSSALLSSSENNGVSVDGGLKNNGRNGQRLLSEHVDNEGFSSSPLDYGRKGVNSGSQMRKNRNGSRLMPEGGRDGFDNEVCSSSSPLSYGRSGGNYDGRMRRNTNGRRPFSKDDDYGSDDGEYSFSPFNSERNGVDGRMRKNGNGRRFPSRDVSGSDDGEYPSSPFSSERNGGTVDGRMRKNGNGRRLASRDVNGSNGSYSGRVGSGMRQGRGNPSANRRGWKLRVSQEERNSPLEFPIKQLGTYVPPSNFALNHNLNHVYKQLKLTSSYPCSTFKLCTQPKPSLESKQIDVETITRIINDHPFPDQSLRPTLLHHLPPSTITTRLIENVLGHLFASHCNGLKALEFFNFTLHHSYSRLSPDSLEKTLHILTRMRYFEKAWSLLKEIGRTHPSLLTLKSMSIMLTKIAKFQSVDDTLEAFRRMEHDVFVGKVFGTDEFNVLLKAFCTQRQMKEARSVFVKMVPRFSANTKTMNILLLGFKESGDVTSVELFYHEMVKRGFNPDGVTYNIRIDAYCKKACLGDALRVLDEMEQRGFVPTIESITTLIHGTGLVRNKGKAWQLFNEIPSRNLVVDTGAYNALISTLV 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01148 728 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 420 728 - -
Adu02g01148 728 MobiDBLite consensus disorder prediction 244 262 - -
Adu02g01148 728 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 646 680 IPR002885 -
Adu02g01148 728 TIGRFAM PPR: pentatricopeptide repeat domain 648 681 IPR002885 -
Adu02g01148 728 TIGRFAM PPR: pentatricopeptide repeat domain 614 646 IPR002885 -
Adu02g01148 728 Pfam Pentatricopeptide repeat domain 668 727 IPR002885 -
Adu02g01148 728 MobiDBLite consensus disorder prediction 190 206 - -
Adu02g01148 728 MobiDBLite consensus disorder prediction 277 297 - -
Adu02g01148 728 MobiDBLite consensus disorder prediction 145 182 - -
Adu02g01148 728 Gene3D Tetratricopeptide repeat domain 488 627 IPR011990 GO:0005515
Adu02g01148 728 MobiDBLite consensus disorder prediction 332 347 - -
Adu02g01148 728 Gene3D Tetratricopeptide repeat domain 628 728 IPR011990 GO:0005515
Adu02g01148 728 Pfam PPR repeat family 611 659 IPR002885 -
Adu02g01148 728 PANTHER OS06G0694600 PROTEIN 420 728 - -
Adu02g01148 728 Pfam PPR repeat 581 605 IPR002885 -
Adu02g01148 728 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 611 645 IPR002885 -
Adu02g01148 728 MobiDBLite consensus disorder prediction 145 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01148 Adu-Chr2 24541882 24545372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01148 1 140 Inorganic Solute Cotransporters AT2G37920 75.000 3.28e-70 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01148 - - adu:107486744 603.594