Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01118 ATGGCGACGGCAGCGGCGTCACGGCGGCTTCGGGATCTGCAGTCCCAACCAGCAAACAAGATCTGCGTAGACTGCTCCCAGAAGAACCCGCAGTGGGCCTCCGTCTCCTACGGCGTCTTCATGTGCCTCGAGTGCTCCGGCAAGCACCGCGGCCTCGGCGTGCACATCTCCTTCGTCCGATCCGTCACCATGGACGCATGGTCCGAAATCCAGCTCAAGAAGATGGAAGCTGGGGGCAACAATAACCTCAACTCCTTCCTCGCCTCTTATTCTGTTCCCAAGGAAACTGATATAGTTAAGAAGTACAACACCAAAGCCGCCGCTATCTACCGTGATCGCATCGCCGCAATTGCCGAAGGGCGGCCGTGGCGCGATCCGCCTGTTCAGAGGGAGGATCTCGCTGGAGGATTCGCTGCTGGAAAGAGAAAGCCTCCGATGAACGGCGGGGGAGGAGGGAACAAGCGGAATGACGGCGATTGGGAGGATTGGGGAACCGATGATGGTTTCGGCGGGGATTTGCGACGGAATCAGTCTGCTGGCGATAGGATCAATCAGCAAAACGACTATTTCTCCGTCGTTTCGCAGGGGTTTGGTAAATTATCGTTGGCGGCTCAGACTGCTGCTTCTAAGGTCAAAGAAGGTGGTTATGATCAAAAAGTCAATGATGTCACTCAGAAGACATGGGGTATAATGAAAGGTGTCATAGCTATGGCTTCAGAGAAGGTAGAAGAGTACACCAGAGATGGCTCAAATGGAATGAACAATAATTGGCAACAAAATGAGAGTGGCAGGAATGGTTACCATCAGGATTTCAATCAACAGAACCAGGGATGGAATTCTTCTACCAGAACTGAACAATCCTCTTCTAAGCAATTTAACACCCACAGCTCAAGTTCTTGGGATGATTGGAACAATAAAGGAAGGAAGAACCAGCGAGAGGATCGGCGGCAAATAACGACGATGGATGGGCTGGCTGGGATGATGACAAAGATGATGGATTTGATCATTCTTATTATGAAGGTGGATCTAAAGATAAGAAAGGTGTTACTAACTATGGGAAATCCGATGGTGGCTGGACAGGGGCAGGCTTTGCCTAAGACAAGGTTTGATCCGTTGTTATTGCCACATCGAGCATTTTCCAAAAATTGGAAAAAAAGAAGATTTGGTAGCATTAGGGCTGATGACATGCAGGCCGAGCAGAGAGATACTACTATATACATTATGTATGTGATCCAAATATAA 1242 0.4944 MATAAASRRLRDLQSQPANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDAWSEIQLKKMEAGGNNNLNSFLASYSVPKETDIVKKYNTKAAAIYRDRIAAIAEGRPWRDPPVQREDLAGGFAAGKRKPPMNGGGGGNKRNDGDWEDWGTDDGFGGDLRRNQSAGDRINQQNDYFSVVSQGFGKLSLAAQTAASKVKEGGYDQKVNDVTQKTWGIMKGVIAMASEKVEEYTRDGSNGMNNNWQQNESGRNGYHQDFNQQNQGWNSSTRTEQSSSKQFNTHSSSSWDDWNNKGRKNQREDRRQITTMDGLAGMMTKMMDLIILIMKVDLKIRKVLLTMGNPMVAGQGQALPKTRFDPLLLPHRAFSKNWKKRRFGSIRADDMQAEQRDTTIYIMYVIQI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01118 413 MobiDBLite consensus disorder prediction 246 317 - -
Adu02g01118 413 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 183 326 IPR044519 GO:0005096|GO:0016192
Adu02g01118 413 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 4 181 IPR044519 GO:0005096|GO:0016192
Adu02g01118 413 MobiDBLite consensus disorder prediction 137 166 - -
Adu02g01118 413 SUPERFAMILY ArfGap/RecO-like zinc finger 8 115 IPR037278 -
Adu02g01118 413 SMART arf_gap_3 4 123 IPR001164 GO:0005096
Adu02g01118 413 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 183 326 - -
Adu02g01118 413 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 4 181 - -
Adu02g01118 413 MobiDBLite consensus disorder prediction 248 304 - -
Adu02g01118 413 Pfam Putative GTPase activating protein for Arf 8 105 IPR001164 GO:0005096
Adu02g01118 413 ProSiteProfiles ARF GTPase-activating proteins domain profile. 7 123 IPR001164 GO:0005096
Adu02g01118 413 PRINTS HIV Rev interacting protein signature 19 38 IPR001164 GO:0005096
Adu02g01118 413 PRINTS HIV Rev interacting protein signature 38 55 IPR001164 GO:0005096
Adu02g01118 413 PRINTS HIV Rev interacting protein signature 59 80 IPR001164 GO:0005096
Adu02g01118 413 CDD ArfGap_ArfGap1 6 120 - -
Adu02g01118 413 Gene3D Arf GTPase activating protein 1 127 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01118 Adu-Chr2 22544223 22547290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01118 8 90 C2H2 Transcription Factor Family AT4G05330 51.190 4.57e-24 100