Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01087 ATGGAAAGTACGCAATCCAGTTCGTCTACAAGCTTAGTTGACAAGTTAGTGTGTCCTGGAGATGTGGTTCTTGACCTCTCTAACTTGACAAATCAGACAATTAAGCTTGGAGGAGGTCTATATCAGGACTGTGATGCAATTTCAGTAATGAAAGCTGGCAAGCTAAGGTTCTCGAAACCTAATAAATATTGGGTTGAAAGTTCTCAGAAAAGGTATGTGCCCCATGCAGAAGATTCTGTCCTTGGAATTGTTGTAGACTCTAGATCAGATAATTTTCTTGTAGACATAAAGGGGCCTTCATTAGCATTTCTGCCAGTGCTTGCATTTGAAGGAGGAACCAGAAGAAATATACCCAAATTTGAGGCAGGTACATTGATTTATGTGCGAGTTGTGAAAGCAAACCCTGGAATGAATCCAGAGCTGTCATGTACTGATGCAACCGGGAGAGCAGCAGAATATGGTGCCTTGAAAGAGGGTTTTATGTTCGAATGTTCAACTGGCCTCTCAAGAACGCTTCTCAGCTCGCCAACATGTCCAGTACTAGAAGCTTTAGGGAAGAAGCTGTCTTTTGAAATAGCAGTTGGTTTAAATGGACGTGTTTGGGTGAATTCAGCATCTCCTTCTACAACTATCATTGTATCTAATGCAATTATGAACTCAGAGTCGTTGAGTGGGGCTCAGCAGAGAATAATGAGGGAACATCAAGATGACGTGAAGATAACAAGCTCTTATCTCCGAAAAAGAAAAGGAAAAGTAATCACCTGCAAAGCTGCTGTGGCTTGGGAACCAAACAAGCCATTGAGTGTTGAGGATGTTGACGTGGCACCACCGCAGGCTGGAGAGGTCAGAATCAAAATTCTCTACTCTGCTCTCTGTCACACAGATGCTTATACTTGGAGTGGCAAGGATCCAGAAGGTCTATTCCCCTGTATACTTGGTCATGAGGCTGCTGGGATTGTGGAAAGTGTTGGCGAAGGTGTTACTTCAGTTCAGCCTGGAGATCATGTCATACCCTGCTACCAAGCTGAATGTGGAGACTGCAAGTTCTGCAAATCCGGCAAAACAAACCTCTGCGGCAAGGTTCGTTCGGCCACCGGAGTTGGCGTCATGCTGAGCGATCGCAAGAGTCGTTTCTCCGTCAATGGAAAGCCTATCTATCATTTCATGGGAACTTCCACATTTAGTCAATACACTGTTGTTCATGATGTTAGTGTGGCTAAGATTGATCCCAATGCACCTTTGGACAAAGTTTGTCTTCTTGGATGTGGGGTTCCAACTGGCCTTGGAGCTGTTTGGAACACAGCAAAGGTGGAAGCAGGTTCAATTGTTGCTGTTTTTGGCCTTGGAACTGTTGGTCTTGCTGTTGCGGAGGGTGCAAAAGCTGCCGGTGCATCACGGATTATTGGCATAGATATCGATCGCAATAAGTTTGAAAGAGCAAAGAATTTCGGAGTCACAGAGTTTATCAATCCAAAGGAGCATGAAAAGCCAATTCAGCAGGTCATAGCTGATCTCACAGATGGTGGAGTTGATTACAGCTTTGAGTGCATTGGAAATGTCTCGGTGATGAGAGCTGCTTTGGAATGCTGCCATAAAGGCTGGGGTACATCAGTAATTGTAGGTGTTGCAGCATCAGGTCAAGAAATATCGACTCGGCCCTTCCAGTTGGTGACCGGGCGAGTCTGGAAAGGAACAGCTTTCGGAGGCTTCAAGAGCAGGTCACAAGTACCTTGGCTTGTTGACAAGTACATGAAGAAGGAAATCAAGGTTGATGAGTACATTACACACAGTTTGAACCTTGCTGAGATTAACAAAGCATTTGACCTTTTGCATGAAGGAGGGTGTCTCCGTTGTGTTCTTGCATTGCATGTATGA 1875 0.4475 MESTQSSSSTSLVDKLVCPGDVVLDLSNLTNQTIKLGGGLYQDCDAISVMKAGKLRFSKPNKYWVESSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEAGTLIYVRVVKANPGMNPELSCTDATGRAAEYGALKEGFMFECSTGLSRTLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNSASPSTTIIVSNAIMNSESLSGAQQRIMREHQDDVKITSSYLRKRKGKVITCKAAVAWEPNKPLSVEDVDVAPPQAGEVRIKILYSALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTSVQPGDHVIPCYQAECGDCKFCKSGKTNLCGKVRSATGVGVMLSDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPNAPLDKVCLLGCGVPTGLGAVWNTAKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDRNKFERAKNFGVTEFINPKEHEKPIQQVIADLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHSLNLAEINKAFDLLHEGGCLRCVLALHV 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01087 624 PANTHER S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASE 248 621 - -
Adu02g01087 624 SUPERFAMILY Ribosomal L27 protein-like 9 70 - -
Adu02g01087 624 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 413 586 IPR036291 -
Adu02g01087 624 Gene3D - 74 150 IPR012340 -
Adu02g01087 624 SUPERFAMILY GroES-like 249 443 IPR011032 -
Adu02g01087 624 SUPERFAMILY GroES-like 572 620 IPR011032 -
Adu02g01087 624 Pfam Zinc-binding dehydrogenase 451 573 IPR013149 -
Adu02g01087 624 Gene3D K Homology domain, type 1 152 235 IPR036612 GO:0003723
Adu02g01087 624 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 313 327 IPR002328 GO:0008270|GO:0016491
Adu02g01087 624 Gene3D - 258 617 - -
Adu02g01087 624 PANTHER ALCOHOL DEHYDROGENASE 248 621 - -
Adu02g01087 624 CDD alcohol_DH_class_III 253 620 IPR014183 GO:0006069|GO:0008270|GO:0051903
Adu02g01087 624 Pfam KH domain 159 207 IPR004088 GO:0003723
Adu02g01087 624 TIGRFAM adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 255 621 IPR014183 GO:0006069|GO:0008270|GO:0051903
Adu02g01087 624 Pfam Alcohol dehydrogenase GroES-like domain 280 407 IPR013154 -
Adu02g01087 624 Gene3D - 9 73 - -
Adu02g01087 624 Gene3D - 427 565 - -
Adu02g01087 624 CDD S1_Rrp40 71 156 IPR037319 GO:0003723
Adu02g01087 624 SUPERFAMILY Nucleic acid-binding proteins 70 162 IPR012340 -
Adu02g01087 624 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 158 231 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01087 Adu-Chr2 21005147 21016392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01087 255 576 Monolignol Biosynthesis Gene Families AT1G72680 25.610 4.03e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01087 K00121 - gmx:100793008 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01087 02 21005147 21016392 Adu02g01087 02 21005147 21016392 ECH
Adu06g00046 06 623514 626786 Adu02g01087 02 21005147 21016392 PCT