Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01078 ATGATTGATTCTCGTTGCAGAGCCACCGTTGGTACTGTCTCAAATCCAAGCCATGGAGATAAGAAGCTTAGGAAGGCTGGACAAAGCCGGTGGCTTGGCCGGAGACCAGTTGTTCGAGGAGTGGCCATGAATCCAGTGGACCATCCTCATGGTGGAGGAGAGGGCAAGAGCAAGAGTAGTGGTCGGTGGGGAAAAGGATCTCGAACTCCTTGGGGTAAGCCGACTAAGAGTGGATTCAAGACCGGGCCCCTGAAACGGAGGAAGTAG 267 0.5393 MIDSRCRATVGTVSNPSHGDKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGKGSRTPWGKPTKSGFKTGPLKRRK 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01078 88 MobiDBLite consensus disorder prediction 40 88 - -
Adu02g01078 88 SMART Ribosomal_L2_C_2 1 74 IPR022669 GO:0003735|GO:0005840|GO:0006412
Adu02g01078 88 SUPERFAMILY Translation proteins SH3-like domain 1 77 IPR008991 -
Adu02g01078 88 PANTHER RIBOSOMAL PROTEIN L2 1 88 IPR002171 GO:0003735|GO:0005840|GO:0006412
Adu02g01078 88 Pfam Ribosomal Proteins L2, C-terminal domain 1 72 IPR022669 GO:0003735|GO:0005840|GO:0006412
Adu02g01078 88 ProSitePatterns Ribosomal protein L2 signature. 36 47 IPR022671 GO:0003735|GO:0005840|GO:0006412
Adu02g01078 88 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 1 88 - -
Adu02g01078 88 MobiDBLite consensus disorder prediction 1 28 - -
Adu02g01078 88 Gene3D Ribosomal protein L2, domain 3 14 88 IPR014726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01078 Adu-Chr2 20668075 20668341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01078 1 54 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 49.153 1.24e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01078 - - ahf:112722953 171.785