Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01062 ATGCAGGGTGTTACTATTATTCCTACTGGCGGTAGTGGTGGTGGTTCTACCATGTCTTCTACTTTGTCAAAGGAAGACACAAACTTGGTTCTTTCTTCTGAGGACTCTTCTTGCCCTGAAGATTCTGAGTTGCTTGAACTTGGTCTTGGATTAGGCCTTTCTCATCATCATAAACCTGCTCGTAAATCACACAGTCACCATCATCATCATGCTAGAATTTTGACCGCTAAGGATTTTCCTTCTTCAGCTTCAGCTTCTTCCTCATCTTCATCTTCACCTCCTTCTTCTTCTTTGAGCAGGGTAAACAACAACACTACCACCTCCACTTCTGGCACCAAGAGAACTGCTGAGTCTGTTGCTGCTGCTAATAATGGACCTAGTCCGGTAGTTGGATGGCCTCCCCTCAGAAGACCATACAGAGTGAATAGCTTTAATCATTCAAAATCTCCAGCCACCGAGGTGTTCAACTCAAATTCCGAGAAGAGTAAGAGCAGCGAAACTGATGTGCTAAGGAAGAATGCTGATAATACCAATGGTAATAACAACAACATTGATACCAAAGAAAAAAGAAACTTCCGGAGTTCCTTGTTTGTCAAGGTAAATATGGACGGGATAGCGATTGGAAGGAAGGTCGATTTGAGTGTCCATAGTTCTTATGAAACCTTAGCTCAAACATTGGAGGATATGTTTAGAGAATCAACTACAGCAATCACTTTCAATGGATCAAACGGAGAAGACTTCGGTATTCTTGTTGGAGGAGATCAACACTCAAAATTGCTGGATGGTTCTTCGAAGTTTGTGCTAACTTATGAAGACAAGGATGGAGATTGGATGCTTGTTGGAGATGTTCCTTGGGGGATGTTCCTTAGCTCAGTGAGGAGGCTTAGAATCATGAGAACATCTGAGGCCAATGGAAATGGACTTGCACCAATGTTGGAAGAAAAGAACTGCAGACAGAAAAGCAAGCCCATATAG 975 0.4267 MQGVTIIPTGGSGGGSTMSSTLSKEDTNLVLSSEDSSCPEDSELLELGLGLGLSHHHKPARKSHSHHHHHARILTAKDFPSSASASSSSSSSPPSSSLSRVNNNTTTSTSGTKRTAESVAAANNGPSPVVGWPPLRRPYRVNSFNHSKSPATEVFNSNSEKSKSSETDVLRKNADNTNGNNNNIDTKEKRNFRSSLFVKVNMDGIAIGRKVDLSVHSSYETLAQTLEDMFRESTTAITFNGSNGEDFGILVGGDQHSKLLDGSSKFVLTYEDKDGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGNGLAPMLEEKNCRQKSKPI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01062 324 Gene3D - 190 310 - -
Adu02g01062 324 MobiDBLite consensus disorder prediction 171 185 - -
Adu02g01062 324 MobiDBLite consensus disorder prediction 1 41 - -
Adu02g01062 324 MobiDBLite consensus disorder prediction 142 163 - -
Adu02g01062 324 Pfam AUX/IAA family 46 305 IPR033389 -
Adu02g01062 324 ProSiteProfiles PB1 domain profile. 195 302 IPR000270 GO:0005515
Adu02g01062 324 SUPERFAMILY CAD & PB1 domains 189 298 - -
Adu02g01062 324 MobiDBLite consensus disorder prediction 1 38 - -
Adu02g01062 324 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 22 310 IPR003311 GO:0005634|GO:0006355
Adu02g01062 324 MobiDBLite consensus disorder prediction 79 187 - -
Adu02g01062 324 PANTHER AUXIN-RESPONSIVE PROTEIN IAA11 22 310 - -
Adu02g01062 324 MobiDBLite consensus disorder prediction 79 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01062 Adu-Chr2 19228906 19232970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01062 158 303 B3 DNA Binding Superfamily AT1G59750 28.082 3.47e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu02g01062 AUX_IAA 2.2e-58 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01062 K14484 - gmx:100527033 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01062 02 19228906 19232970 Adu02g01062 02 19228906 19232970 ECH