Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01050 ATGAATAAAAACAAGACTAGGATCATCAAGTGTGGAGCTTTGCCAGTTCTGCTGAATCACCTTCACTCTCAAAGCCAGACAGTGGTGCAATTGACAGTAGCAGCCATGCTAACCCTCTCATCCTGCAAGGCAAATAAGGTTGCAATTGCTTCATCCGGTGCTCTACAACACTTGGCTGAATTTGTAATAGCGGCGATTGGTTTGCTCGAAAATATTGTCTCTTCATCAGAGAGTGCACTTTGTGAGGCGGCTAGTGTTGGTGGGGCAATTCGGATACTGGTCGAGACTATTGAAGATGGATCATCACTAGGGNNNCACGCAGTTGGTATACTTTTCCTTATATGCCAAAGTTGCAGAGAGAAATACAGAGGAATGATTCTAAGAGAGGGAGGGATGCCAGGACTGCATCAGTTAAGCATAGATGGAACGCGGAGAGCCAAGAACATGGCTCGAGAACTGTTGTTGCTTCTGAGAGATTACTCCGATTATAGTTCAAGACAAACACAAATAATCATGAGCTCATAG 525 0.4438 MNKNKTRIIKCGALPVLLNHLHSQSQTVVQLTVAAMLTLSSCKANKVAIASSGALQHLAEFVIAAIGLLENIVSSSESALCEAASVGGAIRILVETIEDGSSLGXHAVGILFLICQSCREKYRGMILREGGMPGLHQLSIDGTRRAKNMARELLLLLRDYSDYSSRQTQIIMSS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01050 174 Gene3D - 1 173 IPR011989 -
Adu02g01050 174 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 12 54 IPR000225 GO:0005515
Adu02g01050 174 PANTHER U BOX DOMAIN-CONTAINING 64 169 - -
Adu02g01050 174 SUPERFAMILY ARM repeat 3 165 IPR016024 -
Adu02g01050 174 Pfam Armadillo/beta-catenin-like repeat 2 36 IPR000225 GO:0005515
Adu02g01050 174 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 62 - -
Adu02g01050 174 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 64 169 - -
Adu02g01050 174 PANTHER U BOX DOMAIN-CONTAINING 2 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01050 Adu-Chr2 18403198 18404339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01050 1 159 U-box Gene Family AT2G23140 29.268 1.46e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01050 - - lja:Lj2g3v0922610.1 164.081