Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01034 ATGGAAGCCCGTCCTTCTATATCCATTGAAAGATCAAGTGCGGAGAAACACAATGTCATGGGGATGTCTGGAGCACTATCTTCATCCTTGGCAGTCCTTCCAACACCCCTAGAAGAGACATATAATAAGTTGCCTGATTCACCTCTTGCTTTTGTAGAAGAAGGGCTGATGAGTGGACCTTTAACTCATTCTGGTCATTTAAATAACAACGGAGCAGTTGGACATATCTTTTCATCTTCTCCTGGATATTCAACTGCTCTTCACCATTCATCCCTTTCACCTCATGAAAAGCATTCTAGAAATGCTCACATTATTTCACATTCATCAACTAATATGGCTACATTGCCACCATTTTCTTCAAATAGTGGACCACTACCTTCCAAACCATCAAGGCATTTTCCTAATGAAAACAGTGCCTCCTGGCATACTGATTCTGTGCCAAGCTTTCTGGATTTTCCCGCAAATACTTCCATCGATAGTGGTAGGGTAGAAAGTGGTGCCTGCACTATCATGGCATCTGAGGAATATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTAACTTCTAATTTGAATGATCTTCTTGCTGATAATGTTCCAGATCCTGAGCCAAAGGAGCCATTCCAGGTTTCAAAACCATCTTTGCAATTACCAGGGCATCCATCCGAAGGCCATCAACAACTTCCTGCTTCATCTGAAGAAAATTGCGCTGGTGCTGCCCCTTCTTCCTCAGCAAAATCTGCTCCTTCCAAGCCACGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTCGTGGATGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGCTTAACTATATATCATGTCAAAAGCCACTTGCAGAAATACAGGACAGCTAGATATAGACCCGACTCGTCTGAAGGAGTCTCAGAGAAAAAAACAAGTTCCATTGAAGAGATGGCATCACTAGATTTGAGAACTGGCATTGATATCACTGAAGCTCTGCGACTGCAAATGGTGGTTCAGAAGCAGTTGCATGAACAACTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTATCTCCAGATGATGTTTGAGAAGCAATGTAAACCCGAGACTGAAATGTTTAAGGCATCATTATCTACTGCTGAAAATCCATCTGGATCCTCTTTGGATGCCATGCAAGATGTTCCAGCCAAAAGCGCATCAATGGTGGACAATTACAAGCCAGGACCTGATCAAGCTATCGGCAGCACCAAGGTTGTGGAAGGCTCAGTGGAAATAGGGGGGAAACATGATTCTCCCAAAACACAACTTTCTGAGAATCCTAAGCAGCATGCTAATGCTAACGATGATGCTGCTCAAGCCTCGAAGCGTCAAAGAAAAGATGAGTAA 1458 0.4342 MEARPSISIERSSAEKHNVMGMSGALSSSLAVLPTPLEETYNKLPDSPLAFVEEGLMSGPLTHSGHLNNNGAVGHIFSSSPGYSTALHHSSLSPHEKHSRNAHIISHSSTNMATLPPFSSNSGPLPSKPSRHFPNENSASWHTDSVPSFLDFPANTSIDSGRVESGACTIMASEEYCKQNDWQEWADQLISDDDTLTSNLNDLLADNVPDPEPKEPFQVSKPSLQLPGHPSEGHQQLPASSEENCAGAAPSSSAKSAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPDSSEGVSEKKTSSIEEMASLDLRTGIDITEALRLQMVVQKQLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPETEMFKASLSTAENPSGSSLDAMQDVPAKSASMVDNYKPGPDQAIGSTKVVEGSVEIGGKHDSPKTQLSENPKQHANANDDAAQASKRQRKDE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01034 485 MobiDBLite consensus disorder prediction 461 475 - -
Adu02g01034 485 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 25 482 IPR044848 GO:0003700
Adu02g01034 485 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 260 314 IPR006447 GO:0003677
Adu02g01034 485 MobiDBLite consensus disorder prediction 422 485 - -
Adu02g01034 485 SUPERFAMILY Homeodomain-like 258 314 IPR009057 -
Adu02g01034 485 MobiDBLite consensus disorder prediction 234 259 - -
Adu02g01034 485 Pfam MYB-CC type transfactor, LHEQLE motif 346 391 IPR025756 -
Adu02g01034 485 Pfam Myb-like DNA-binding domain 262 313 IPR001005 -
Adu02g01034 485 Gene3D - 259 318 - -
Adu02g01034 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 257 317 IPR017930 -
Adu02g01034 485 MobiDBLite consensus disorder prediction 201 263 - -
Adu02g01034 485 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 25 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01034 Adu-Chr2 17468407 17471771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01034 1 389 G2-like Transcription Factor Family AT4G28610 48.492 2.28e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu02g01034 Myb_DNA-binding 1.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01034 - - aip:107624999 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01034 02 17468407 17471771 Adu02g01034 02 17468407 17471771 ECH
Adu06g00066 06 842214 847470 Adu02g01034 02 17468407 17471771 ECH
Adu06g00066 06 842214 847470 Adu02g01034 02 17468407 17471771 PCT
Adu06g00286 06 3483791 3487643 Adu02g01034 02 17468407 17471771 PCT