Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01012 ATGGAAACTGCACCCGCTTGCTTCTTCTGCGGTGGAATCCCTGCAACTGCAACTGCCACAGCGACATCAACTCCGAATTCTGTGCCTTTCCGTTGTACCGTTAGAGTTCCCTTCTCTTCTTCGTTTGCCTCGCTCTGCCTGTTAGCTCGTACCAGGCACGGCGGCGGCGGCGGTGGCGCTTCTGTTTTTCGCTCTTTGTTCTCGTCGTCGTCTTCGTCGGTCACCGGCCTCGGCCTAATTCGAAGCGCCGCTAACAGCGAAACGAAGCTCCCGGCTCCAAGTAACGCTAAACGAAGTAGAAGAAGAACGCGAACGCGAACTGTTTCTCCTCCTACTCCTCGGCCTCCGTCTCCGGAGAAAACTAACAGTAACGGTAACGGTAACAGCAATGAGAATGGGGATCCTCTCGGGTGGAAGGATCTTGGGAAGAGTGTTGTGAGATGGATTAGGGAGGGCATGAGGGCCATGGCGTTGGATTTCGCGGCGGCGGAGTTGCAGGGGGAAGTGGAATTCGGTGAGCTGAGTCAGCGAATGGGGCCTGGTCTGACTTTTGTGATCGAGGCTCAGCCTTATCTGAACGCTGTTCCGATGCCACTTGGGCTTGAAGTGATGTGCTTCAAGGCCTGCACACACTACCCAACTCTCTTTGATCACTTCCAGAGGGAGCTTCGGGAGGTTCTCCAGGACCTTCAGAATAAGTCCTTGCTCCAAGACTGGCGCCAAACGCAGTCTTGGAAGCTGCTTAAAACTCTCGCCAATTCAGCTCAGCATCGAGCAGTGGCCAGAAAGATAGTCCATCCCCTGCCCAAGACTGTCCAAGGTGTTTTAGGAATGGACTTGGACAAGGTCAAAGCAATGCAGCAGAGGATTGAGGATTTCACCAACCGCATGTCTGAACTACTCCGTATTGAAAGGGATGCTGAATTGGAGTTCACTCAGGAGGAATTGGATGCTGTTCCTAGGCCTCTGGATGATGCTTCCGACCCCTCAAGACCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTCTGTGACACCATTTGCAACTTAACTGCCATCAGTACCTCTACCGGACTTGGGGGAATGCATTTGGTGTTGTTCAAGGTTGAAGGTAACCATCGATTACCACCTACTACTCTTTCACCTGGAGATATGGTTTGTGTCAGAACATGTGACAGCAGGGGTGCAGTTACAACATCTTGCATACAAGGATTTGTGAACAATCTTGGGGATGATGGCTGCAGTATTATTATTGCTCTAGAGTCACGCCATGGTGATCCTACGTATAGTGGAAATATTTTGTGGTTTGAAGAAACATTTTTTCGCAACTGTGAAGCTCTAATGCTGCTTCAGAAGAATGGCTTGCGGAAGAAGAATCCTTCAATTGCTGTTGTAGCTACACTCTTTGGAGAAGAGGAAGATGTCACATGGCTTGAGAAGAACAATTTTGTTGACTGGGAAGAAGAAAAATTAAATGGACTGCTAGAAAATGAAACATTCGATAGTTCTCAGCAGCGAGCAATTGCATTGGGTTTGAATAAGAAGAGACCTGTATTGGTTATCCAAGGGCCTCCGGGTACAGGCAAGACTGGTTTGCTCAAGCAACTTATAGTATGTGCCGTTCAACAAGGTGAAAGGGTTCTAGTGACGGCACCTACGAATGCAGCTGTTGATAACATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTCCGAGTTGGAAATCCTGCTCGTATTTCAAAAGCTGTGGGATCAAAGTCTTTGGGTGCAATTGTAAATTCAAAGCTTGCAAGTTTTCGAGAAGAGTATGAAAGGAAAAAGTCAAATCTAAGGAAGGATCTAAGACTTTGTTTAAAGGACGATTCACTAGCTGCAGGCATACGGCAACTTCTGAAACAGCTGGGAAGGTCTCTCAAGAAAAAAGAAAAACAGACTATGAATGAAGTTTTATCTAGTGCGCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGATCCCTTGATTCGAAGGCTAGATGCTTTTGACTTGGTTGTCATAGATGAAGCGGGACAAGCAATTGAACCATCTTGTTGGATTCCTATATTGCAGGGAAAGCGCTGTATTCTTGCTGGCGATCAATGCCAACTTGCTCCTGTCATATTGTCCAGACAGGCCTTAGAAGGTGGCCTAGGAATATCACTACTGGAGAGAGCTACAGCTTTGCACGAAGGGATTCTAACCACCAGGCTAACAACACAATACCGTATGAATGATGCAATTGCTAGTTGGGCCTCAAAGGAGATGTACGGAGGATTGTTGAAGTCTTCTGAGTCTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTACTTGGATAACCCAATGTCCACTGCTATTGCTTGATACAAGAATGCCATATGGAAGTCTGTCGGTTGGTTGCGGAGAGCATCTGGACCCAGCAGGAACGGGCTCATTTTATAATGAAGGAGAAGCTGATATAGTTCTGCAGCACGTCGTTTCCTTGGTTTATGCTGGTGTTAACCCAGCTGCCATTGTGGTGCAGTCCCCTTATGTCGCTCAAGTGCAGCTTCTGAGGGACATGCTTGATGAGGTACCTGAAGCTGCTGGTACTGAGGTTGCAACCATTGATAGTTTTCAAGGTCGCGAAGCTGATGCAGTAATTTTATCCATGGTACGGTCAAACACATTGGGAGCTGTTGGATTCCTTGGTGATAGCAGAAGAATCAATGTTGCCATCACAAGGGCACGCAAACATGTAGCCGTGGTCTGTGACAGCTCAACAATATGCCACAACACCTTCCTGGCAAGACTTCTGCGTCACATTCGACACTTTGGTCGGGTGAAGCATGCAGAACCAGGTAGTTTTGGGGGTTCTGGACTAGGGATGAACCCCACATTACCCTCCATTAATTAG 2934 0.4751 METAPACFFCGGIPATATATATSTPNSVPFRCTVRVPFSSSFASLCLLARTRHGGGGGGASVFRSLFSSSSSSVTGLGLIRSAANSETKLPAPSNAKRSRRRTRTRTVSPPTPRPPSPEKTNSNGNGNSNENGDPLGWKDLGKSVVRWIREGMRAMALDFAAAELQGEVEFGELSQRMGPGLTFVIEAQPYLNAVPMPLGLEVMCFKACTHYPTLFDHFQRELREVLQDLQNKSLLQDWRQTQSWKLLKTLANSAQHRAVARKIVHPLPKTVQGVLGMDLDKVKAMQQRIEDFTNRMSELLRIERDAELEFTQEELDAVPRPLDDASDPSRPIEFLVSHSQPQQELCDTICNLTAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDSRGAVTTSCIQGFVNNLGDDGCSIIIALESRHGDPTYSGNILWFEETFFRNCEALMLLQKNGLRKKNPSIAVVATLFGEEEDVTWLEKNNFVDWEEEKLNGLLENETFDSSQQRAIALGLNKKRPVLVIQGPPGTGKTGLLKQLIVCAVQQGERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKAVGSKSLGAIVNSKLASFREEYERKKSNLRKDLRLCLKDDSLAAGIRQLLKQLGRSLKKKEKQTMNEVLSSAQVVLATNTGAADPLIRRLDAFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRQALEGGLGISLLERATALHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSESVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCGEHLDPAGTGSFYNEGEADIVLQHVVSLVYAGVNPAAIVVQSPYVAQVQLLRDMLDEVPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGSGLGMNPTLPSIN 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01012 977 Coils Coil 604 624 - -
Adu02g01012 977 Gene3D - 335 437 - -
Adu02g01012 977 Pfam AAA domain 503 719 IPR041677 GO:0004386
Adu02g01012 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 940 IPR027417 -
Adu02g01012 977 SMART AAA_5 518 733 IPR003593 -
Adu02g01012 977 Gene3D - 297 735 IPR027417 -
Adu02g01012 977 CDD SF1_C_Upf1 753 949 IPR041679 -
Adu02g01012 977 MobiDBLite consensus disorder prediction 119 133 - -
Adu02g01012 977 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 115 977 - -
Adu02g01012 977 SMART ultradead3 499 751 IPR014001 -
Adu02g01012 977 MobiDBLite consensus disorder prediction 85 137 - -
Adu02g01012 977 Coils Coil 283 310 - -
Adu02g01012 977 Gene3D - 751 959 IPR027417 -
Adu02g01012 977 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 115 977 - -
Adu02g01012 977 Pfam AAA domain 729 932 IPR041679 -
Adu02g01012 977 CDD DEXXQc_SMUBP2 503 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01012 Adu-Chr2 17049476 17055191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01012 489 692 Core DNA Replication Machinery Family AT1G08840 26.699 1.65e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01012 - - aip:107625008 1787.31