Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00995 ATGAAGCTTTCAACATCAGGGTTGCCTCAGCAGGGACAACATGAAGGAGGGGAGAAGAAGTGCTTGAATTCTGAGCTATGGCATGCATGTGCGGGTCCATTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTTGCTGCCACAACTAACAGAGAAGTTGATGGCCACATACCGAATTACCCGAGCTTGCCTCCCCAGTTGATTTGCCAACTTCACAATGTCACGATGCATGCAGATGTTGAAACAGATGAAGTTTATGCCCAAATGACACTGCAGCCGTTGACTCCGCAAGAGCAGAAGGATACATTTCTTCCCATGGAATTGGGAGTTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACCTTAACTGCTAGTGACACCAGCACACATGGAGGGTTTTCTGTTCCGCGTCGTGCAGCTGAGAAAGTTTTCCCTCCGCTGGATTTCTCATTGCAACCGCCTGCACAAGAACTAATTGCTAGAGATCTCCATGATGTTGAGTGGAAATTTCGTCATATTTTTAGGGGACAGCCAAAGAGGCACCTTCTTACTACCGGCTGGAGTGTATTTGTTAGTGCCAAAAGACTTGTGGCAGGAGATTCTGTGCTTTTCATATGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAATCGACCACAAACTGTAATGCCTTCTTCAGTTCTATCCAGTGATAGTATGCATATTGGGCTTCTTGCAGCAGCTGCCCATGCTGCAGCAACTAATAGCTGTTTCACGGTGTTCTATAATCCAAGGTTGGCTAGTCCATCCGAGTTCGTCATACCACTTTCAAAATATATCAAAGCTGTATACCATACACGTGTTTCTGTTGGTATGCGTTTCAGGATGCTTTTCGAGACCGAAGAATCAAGTGTCCGGAGGTACATGGGTACAATAACTGGAATAAGTGACTTGGATCCAGTTCGTTGGCCAAATTCTCATTGGCGATCTGTAAAGGTTGGTTGGGATGAATCCACAGCAGGAGATAGGCAGCCAAGAGTATCACTATGGGAAATTGAGCCTTTAACAACATTCCCAATGTATCCGTCACTATTTCCGCTCAGATTGAAACGTCCATGGCATCCTGGCACCTCATCTTTTCTTGATGGCAGAGATGACCCAACTAATGGGCTAATGTGGCTTAGAGGTGGACCTGGCGACCAAGGTCTGAATTCAATCAATTTTCAAAGTGTTGGAATGCTGCCATGGATGCAGCAGAGGCTTGATCCGGCTTTGCTTGGAAATGATCATAATCAGCAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGAACATAGGGAGTGGAGAACTCTTGAGGCAACAAATGTTGAATTTCCAACAGCCTTTCAATTATCTTCATCAATCAGGAAATGTCAACACTTCTATCCAGCTTCAGCAGCAGCAGCAAACGATTCAGCAATCAGTGCCTTCTAATATCTTGCAGCCACAAGCACCAGTATTGGGAGAGAACATGACTCAGCAGCAGCTCTTTCAGAAATCGCACAACAACCGAGAAGACCATGCGGAGCAGCACACTTATCAAGATGCACTTCTAGTTCAGGGTGACCAGCTCCACCAAAGGCAACACTCTAGTTTGCCTTCGCCATCGTATTCAAAATCAGAGTTTGTAGATTCAAGCATGAAGTTTGAAGCATCAGGTTCACCAGGACAGAACATGCTTGGTTCACTTTGTCCTGAAGGGAGCAGCAATCTCTTGAATTTATCCAGAGGTGGTCATTCGATACCGACAGAACAGTCACCCCAACAATCATGGCCTGCAAAGTATACACCTATGCAGGTTAATGCTTTTGGCAACTCAATGTCACATGTGCAATATTCTGGAAAAGATATTGCAGTGGCATCACCACATCGTAATTCAGACACTCAGAATCCAACCCTCTTTGGAGTCAATATTGATTCATCCGGTCTTCTACTCCCTGCCACTGTCCCACATTATACGACTTCATCCGCTGATACCGATGCTTCAACAATGCCATTAGGGAATTCTGGATACCAGGGTCCTCTATATGCTTGTATGCAAGATTCATCTGAGTTAATGCAAAGTGCGGGACAAGTTGACCCCCAAAACCAGACACCAACCTTTGTCAAGGTTTGA 2175 0.4566 MKLSTSGLPQQGQHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRLASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLDGRDDPTNGLMWLRGGPGDQGLNSINFQSVGMLPWMQQRLDPALLGNDHNQQYQAMLAAGLQNIGSGELLRQQMLNFQQPFNYLHQSGNVNTSIQLQQQQQTIQQSVPSNILQPQAPVLGENMTQQQLFQKSHNNREDHAEQHTYQDALLVQGDQLHQRQHSSLPSPSYSKSEFVDSSMKFEASGSPGQNMLGSLCPEGSSNLLNLSRGGHSIPTEQSPQQSWPAKYTPMQVNAFGNSMSHVQYSGKDIAVASPHRNSDTQNPTLFGVNIDSSGLLLPATVPHYTTSSADTDASTMPLGNSGYQGPLYACMQDSSELMQSAGQVDPQNQTPTFVKV 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00995 724 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 724 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu02g00995 724 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Adu02g00995 724 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Adu02g00995 724 SMART B3_2 129 231 IPR003340 GO:0003677
Adu02g00995 724 Pfam Auxin response factor 255 339 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu02g00995 724 Gene3D - 127 230 IPR015300 -
Adu02g00995 724 CDD B3_DNA 128 229 IPR003340 GO:0003677
Adu02g00995 724 Gene3D - 294 366 - -
Adu02g00995 724 MobiDBLite consensus disorder prediction 544 563 - -
Adu02g00995 724 MobiDBLite consensus disorder prediction 568 611 - -
Adu02g00995 724 PANTHER AUXIN RESPONSE FACTOR 1 724 - -
Adu02g00995 724 SUPERFAMILY DNA-binding pseudobarrel domain 113 258 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00995 Adu-Chr2 16514869 16520275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00995 99 724 B3 DNA Binding Superfamily AT5G37020 65.463 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu02g00995 B3 6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00995 - - adu:107458034 1371.68