Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00992 ATGGCCACTTCCGCCGCCACCGCCACAACTGACGCAGTGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGTGACTTCCAGATGGAATGCTACGTCTTCAAACGCCGAAATGATGTTATTTACATAATTAACCTTGGTAAGACATGGGAGAAGCTCCAACTTGTTGCTAGGATTATTGTTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAATTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAAAGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGATTGTCTGTTTTGGTTATTAGCAAGGATGGCTCTACATATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGAAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGAGAATGGGGGGCTGTTACAGCTAAACAATCCTGGACTGAACTAGTTCCTCAGCAACCCATTCCAGCTGCTCCTGTTAACTGCGCCTCAGACGCCGGTGATTGGGAGCCAGTTCTAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCCCTGGCTGGGACTAG 924 0.4924 MATSAATATTDAVPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMECYVFKRRNDVIYIINLGKTWEKLQLVARIIVAIENPQDIIVQSARPYGQRIVLKFAQYTGANAIAGRHTPGTFTNQKQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHSIDCLFWLLARMALHMRGTIRPGLKWDVMVDLFFYREPEEAKKQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWGAVTAKQSWTELVPQQPIPAAPVNCASDAGDWEPVLAPQASVPAPGGVAPPGWD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00992 307 Pfam Ribosomal protein S2 27 124 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 Pfam Ribosomal protein S2 126 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 PRINTS Ribosomal protein S2 signature 24 42 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 PRINTS Ribosomal protein S2 signature 54 63 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 PRINTS Ribosomal protein S2 signature 103 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 PRINTS Ribosomal protein S2 signature 166 180 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 Gene3D - 23 228 - -
Adu02g00992 307 SUPERFAMILY Ribosomal protein S2 19 209 IPR023591 -
Adu02g00992 307 PANTHER 40S RIBOSOMAL PROTEIN SA 16 299 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00992 307 PANTHER 40S RIBOSOMAL PROTEIN SA 16 299 - -
Adu02g00992 307 TIGRFAM uS2_euk_arch: ribosomal protein uS2 20 215 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00992 307 ProSitePatterns Ribosomal protein S2 signature 1. 24 35 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 MobiDBLite consensus disorder prediction 273 307 - -
Adu02g00992 307 ProSitePatterns Ribosomal protein S2 signature 2. 128 152 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 CDD RPS2 27 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00992 307 Hamap 40S ribosomal protein SA [rps-0]. 11 256 IPR027498 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00992 Adu-Chr2 16411788 16413829 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00992 15 299 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 69.474 5.36e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00992 K02998 - gmx:100786575 431.409