Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00989 ATGGTTAGCCTTCGTGATCTTTTTCGTTTCTCCTTTTGGATTTTGAGTCTGAATATTATTGAAGAGTGTGTCGATTATGGCGAGTTTGAATGGTATTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTCGCTATCGAGAACCCGGAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGCTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAATATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCAAATGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCTGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTTGCATTCCTACTAATAACAAGGAGAAGCATAGTATTGGTCGTCTGTTTTGGTTATTAGCAAGGATGGTTCTACATATGAGGGGTACTATTCATCCGGGGCTTAAGTGGGACGTAATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGGATTACCAGCTGCCCCAAAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCGGTTCCTCAGCAACCCATTGCAGCTGCTCCTACTAACTGGGCCCCAGACGCCGCTGCAGGTTATTGGGAACCAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCCCTGGCTGGGACTAG 861 0.4727 MVSLRDLFRFSFWILSLNIIEECVDYGEFEWYYIINLGKTWEKLQLAARIIVAIENPEDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGIFTNQMQTSYNEPRLLILTDQMTDHQPIKEGALGNILTIAFCDTDSPMRYVDVCIPTNNKEKHSIGRLFWLLARMVLHMRGTIHPGLKWDVMVDLFFYREPEEAKQQEEEGLPAAPKYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPTNWAPDAAAGYWEPVPAPQASVPAPGGVAPPGWD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00989 286 TIGRFAM uS2_euk_arch: ribosomal protein uS2 31 192 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00989 286 CDD RPS2 26 169 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00989 286 Gene3D - 25 204 - -
Adu02g00989 286 PANTHER 40S RIBOSOMAL PROTEIN SA 33 278 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00989 286 MobiDBLite consensus disorder prediction 259 286 - -
Adu02g00989 286 MobiDBLite consensus disorder prediction 270 286 - -
Adu02g00989 286 SUPERFAMILY Ribosomal protein S2 29 186 IPR023591 -
Adu02g00989 286 Pfam Ribosomal protein S2 99 168 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00989 286 PANTHER 40S RIBOSOMAL PROTEIN SA 33 278 - -
Adu02g00989 286 PRINTS Ribosomal protein S2 signature 31 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00989 286 PRINTS Ribosomal protein S2 signature 80 97 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00989 286 PRINTS Ribosomal protein S2 signature 105 122 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00989 286 PRINTS Ribosomal protein S2 signature 122 133 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00989 286 PRINTS Ribosomal protein S2 signature 143 157 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00989 Adu-Chr2 16403435 16405325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00989 33 278 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 67.480 4.90e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00989 K02998 - gmx:100786575 364.77