Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00987 ATGGTAAGTGGTGGTGGCTGTATTAGGCCTCAAGAGGATTCACTTAATAACCCCATTGATATGGTAGTTGGTACCCTTGGAAGGATTATTCAACATATTGAGGAGGGCAACCTGGTGTATGGCGACTTCAAATACTTGGTCTTGGATGAGGCAGATACAATGTTTGATCGTGGCTTTGGTCCTGATATACGCAAATTTCTGGCCCCATTGAAACATCGTGCATCAAAGTCTGATGGCCTAGGTTTTCTGACCGTCTTGGTAACCACAACAGTGACAAAGGTTCTGAGAACAAGCTGGAAGCATTACTTCAGGTACTTCTGCCAAGCCGAGCAAAAGGCAACAAGCCGTGCGGTGGATCACTACCTTGTTGAAAATATGATTCCTACTGTCAACTACCATGGGGAAGTACCAGCAGAGCAAAGGGTTGAAAACCTCAATAAATTTGAGAATGACATTGATGATCGTCCAACATTAGTTTGCACAGACTTGCCCGCTAGGGGTCTGGACTTGGATGTAGACCATGTTGTTATGTTTGACTTCCCCTTGAACTCTATTGATTACCTTCATTGGACTGGTAGAACTGCTCGTATGGGTGCAAAGGTTAAAATCTTATCATGGAAAGTAATCAGTTTGGTTACAAAGAAGGACTTGATCTTGGCCACTAGAATAGAGGAGGCAATGAGGAAGAATGAGAGTTTGGAGGCTATCACGAAAGAAGGAGTACGAAGGGATATCGCCAGGACCCAAGTTAATGGGCAGAGTGGGAAGGACAGAAAATTAGTTGAAGTTTCTAAAGTTAAGAACAATCCTGGTGGACGTGCCAGTTTAGGGAATAAAGGATCGGATTTGAAATCCGGAAAAGGATCATCATCAGGAAAATCTATGAAGAAAGGGATTAAGGTTTCAAATTCTGTAAAATCCTCCAGTGAAAATAGCTCGAGAAAAGCTTCTTCAGAGTATAAGCAAACAAGTGAAAGGATGTCACCAAATCGACAAATTCTAAACTCAGTACTATAA 1017 0.4228 MVSGGGCIRPQEDSLNNPIDMVVGTLGRIIQHIEEGNLVYGDFKYLVLDEADTMFDRGFGPDIRKFLAPLKHRASKSDGLGFLTVLVTTTVTKVLRTSWKHYFRYFCQAEQKATSRAVDHYLVENMIPTVNYHGEVPAEQRVENLNKFENDIDDRPTLVCTDLPARGLDLDVDHVVMFDFPLNSIDYLHWTGRTARMGAKVKILSWKVISLVTKKDLILATRIEEAMRKNESLEAITKEGVRRDIARTQVNGQSGKDRKLVEVSKVKNNPGGRASLGNKGSDLKSGKGSSSGKSMKKGIKVSNSVKSSSENSSRKASSEYKQTSERMSPNRQILNSVL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00987 338 Pfam DEAD/DEAH box helicase 4 93 IPR011545 GO:0003676|GO:0005524
Adu02g00987 338 MobiDBLite consensus disorder prediction 247 338 - -
Adu02g00987 338 MobiDBLite consensus disorder prediction 282 338 - -
Adu02g00987 338 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 1 95 - -
Adu02g00987 338 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 94 277 - -
Adu02g00987 338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 219 IPR027417 -
Adu02g00987 338 SMART helicmild6 116 198 IPR001650 -
Adu02g00987 338 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 86 245 IPR001650 -
Adu02g00987 338 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 109 IPR014001 -
Adu02g00987 338 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 94 277 - -
Adu02g00987 338 Pfam Helicase conserved C-terminal domain 106 198 IPR001650 -
Adu02g00987 338 CDD SF2_C_DEAD 106 212 - -
Adu02g00987 338 Gene3D - 1 102 IPR027417 -
Adu02g00987 338 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 95 - -
Adu02g00987 338 Gene3D - 103 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00987 Adu-Chr2 16394795 16397446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00987 4 200 Eukaryotic Initiation Factors Gene Family AT3G19760 28.452 1.07e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00987 - - ahf:112766979 444.121