Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00972 ATGGTCACTTCTACCGCCGCCACAACTTACGCAGCGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTCCTGAGGTCCACCTTGGAACCAAAAATTGTGACTTCCAGATGGAACGCTACATCTTCAAACGCCGAAATGATGAGCTTATGAAAGCATTTTTATATTTGGTTGATTTTTCGTATTCCTTGTTCCCAAGTATTTACATAATTAACCTTGGCAAGACATGGGAAAAGCTCCAACTTGCTGCTAGATATATTGTTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGCTGTCCTTAAGTTTGCACAATACACTAGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCATGTGCCACTTATCCCATTAAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAAGGGTACTATTTGTCTGGGGCTTAAGTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAAAATGCCATTCAAGATTTTGATGCTGCTGGCATTGCCGGCTTTCCCGCAGCTGATGGGGAATGGGGGGTTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCGGCAACCCATTGCAGCTGCTCTTGCTAACTAG 807 0.461 MVTSTAATTYAAPRQLSQKEQDIQMMLAPEVHLGTKNCDFQMERYIFKRRNDELMKAFLYLVDFSYSLFPSIYIINLGKTWEKLQLAARYIVAIENPQDIIVQSARPYGQRAVLKFAQYTSANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHHVPLIPLNKGKHSIGCLFWLLARMVLQMKGTICLGLKWDVMVDLFFYREPEEAKQQEEEELPAAPENAIQDFDAAGIAGFPAADGEWGVVTAEQSWTEPVPRQPIAAALAN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00972 268 Gene3D - 22 219 - -
Adu02g00972 268 PANTHER 40S RIBOSOMAL PROTEIN SA 165 231 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00972 268 PANTHER 40S RIBOSOMAL PROTEIN SA 11 158 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00972 268 CDD RPS2 26 184 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00972 268 PANTHER 40S RIBOSOMAL PROTEIN SA 11 158 - -
Adu02g00972 268 SUPERFAMILY Ribosomal protein S2 18 200 IPR023591 -
Adu02g00972 268 Pfam Ribosomal protein S2 26 142 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00972 268 PANTHER 40S RIBOSOMAL PROTEIN SA 165 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00972 Adu-Chr2 16333736 16335388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00972 6 258 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 60.573 1.14e-108 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00972 K02998 - gmx:100818292 337.035