Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00966 ATGCTTACGAGGAGGAAGAAGAGGGCATTGGTGTCATTTCACAACAAAATTAGGTTGAAGCTTCCATTGTCTCCAAATCTCTCAAGAGCGCAAATCTGCACCGCAACCAAGGCCACTTCTGCCGCCGCAACAACTGCCGCAGCGCCACGCCAGATGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGCGACTTCCAGATGGAACGCTACGTCTTCAAACGCCGAAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCTATCGAGAACCCACAGGACATCATTGTTCAGTCTGTTAGGCCATATGGTCAGAGAGTTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGATTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTGGCATTCTTGCCAAAAACAAGGGGAAGCACAATATTGGTTGTCTGTTTTGGATATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATCGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACTAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCTCCGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTTCTCAGCAACCCATTGCAGCTGCTCCTGCTAACTGGGCCCCAGACGCCGCTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGCTGGGACTAG 1035 0.4947 MLTRRKKRALVSFHNKIRLKLPLSPNLSRAQICTATKATSAAATTAAAPRQMSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSVRPYGQRVVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILIDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGILAKNKGKHNIGCLFWILARMVLQMRGTIRPGLKWDVIVDLFFYREPEEAKQQEEEELLAAPEYAIQDFGAAGIAGFSAADGEWGAVTAEQSWTEPVSQQPIAAAPANWAPDAAAGDWEPVPAPQASVPAPGGVAPTGWD 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00966 344 Pfam Ribosomal protein S2 62 157 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 CDD RPS2 62 228 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 MobiDBLite consensus disorder prediction 294 344 - -
Adu02g00966 344 ProSitePatterns Ribosomal protein S2 signature 1. 59 70 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 Gene3D - 58 262 - -
Adu02g00966 344 ProSitePatterns Ribosomal protein S2 signature 2. 163 187 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 PRINTS Ribosomal protein S2 signature 59 77 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 PRINTS Ribosomal protein S2 signature 180 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 PRINTS Ribosomal protein S2 signature 138 155 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 PRINTS Ribosomal protein S2 signature 201 215 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 PRINTS Ribosomal protein S2 signature 89 98 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 PRINTS Ribosomal protein S2 signature 163 180 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00966 344 PANTHER 40S RIBOSOMAL PROTEIN SA 43 336 - -
Adu02g00966 344 TIGRFAM uS2_euk_arch: ribosomal protein uS2 55 250 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00966 344 SUPERFAMILY Ribosomal protein S2 54 244 IPR023591 -
Adu02g00966 344 Hamap 40S ribosomal protein SA [rps-0]. 46 291 IPR027498 GO:0003735|GO:0006412|GO:0015935
Adu02g00966 344 PANTHER 40S RIBOSOMAL PROTEIN SA 43 336 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00966 Adu-Chr2 16294593 16296831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00966 41 336 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 69.595 1.45e-144 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00966 K02998 - gmx:100786575 433.721