Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00957 ATGGCCACTTCTGCCGCCGCCACAACTGCCGCATCGCCACGCCAGCTGTCGCAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGCGACTTCCAGATGGAACGCTACACATGGGCGAAGCTCCAACTTGCTGCTAGGATTGTTATTGCTATCAAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGATGTCGTTAAGTTTGCACAATACATTATTGCGAATGCAATCACTAGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAAGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTTGCATTCCTACTAATAACAAGGAGAAGCACAATATTGGTTGTCTGTTTTGGTTATTAGCATGGATGGTTCTGCAGATGAGGGAGGAGGAGGAATTACCAGCTGCCCCAAAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCAGCTTCCCCACAGCTGATGGAGAATGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAGCAACCCATTGCTGCTGCTCCTGCTACCAGACGCCGCTGCAGGTGATTGGAAACTAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGCTGGAACTAG 789 0.4968 MATSAAATTAASPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYTWAKLQLAARIVIAIKNPQDIIVQSARPYGQRDVVKFAQYIIANAITRRHTPGTFTNQMQTSYNEPRLLILTDPKTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVCIPTNNKEKHNIGCLFWLLAWMVLQMREEEELPAAPKYAIQDFGAAGIASFPTADGEWGLLQLNNPGLNQFLSNPLLLLLLPDAAAGDWKLVPAPQASVPAPGGVAPTGWN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00957 262 PRINTS Ribosomal protein S2 signature 23 41 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00957 262 PRINTS Ribosomal protein S2 signature 149 163 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00957 262 CDD RPS2 26 176 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00957 262 ProSitePatterns Ribosomal protein S2 signature 1. 23 34 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00957 262 ProSitePatterns Ribosomal protein S2 signature 2. 111 135 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00957 262 SUPERFAMILY Ribosomal protein S2 18 181 IPR023591 -
Adu02g00957 262 PANTHER 40S RIBOSOMAL PROTEIN SA 13 178 - -
Adu02g00957 262 Pfam Ribosomal protein S2 104 171 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00957 262 Gene3D - 22 193 - -
Adu02g00957 262 PANTHER 40S RIBOSOMAL PROTEIN SA 13 178 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00957 Adu-Chr2 16257525 16259563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00957 1 178 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 72.165 1.07e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00957 K02998 - gmx:100818292 331.643