Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00956 ATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTTTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAATATTGGTTGTCTATTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAAGGGTACTATTCGTCTGGGGCTTAAGTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCTCCAGAATATGCCGTTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAGCAACCCATTACAGCTGCTCCTGCTAACTGGGCCCCAAACGCCGCTACAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCATCCGTTCCCGCACCTGGAGGCATGGCAAAAATCCCCGGTGGGGCGGGTACCCGCAGGGATTTACCCGTCGGGGAGCAGCCGTCCTGCTTCAGAGAGAGACAGAGAGCGAGAACTGAGCTGAGACCTGAGACTCTCGTCTCCACTCCTCCTCAAACCCTTAGCCCCTTCTGCCTCCTTCCCGCTGACCACCGACCGTCGCCGCCGCCTTCCACCCTCTGGTCTCTCAGCGCCGCCTCCCACCCCAGACTCAGCAACGTCGTCGTCTTTTCCTGGTCGTGGTCGTCATCTTCTCTTGTTCGCATTGCCAGTCTTCGCTGGACGCTAGTCTTCCTTCCCCTTTTCTCCATCAGGTTCAGGTAA 885 0.5401 MQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDFPMRYVDVGIPANNKGKHNIGCLFWLLARMVLQMKGTIRLGLKWDVMVDLFFYREPEEAKQQEEEELPAAPEYAVQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVPQQPITAAPANWAPNAATGDWEPVPAPQASVPAPGGMAKIPGGAGTRRDLPVGEQPSCFRERQRARTELRPETLVSTPPQTLSPFCLLPADHRPSPPPSTLWSLSAASHPRLSNVVVFSWSWSSSSLVRIASLRWTLVFLPLFSIRFR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00956 294 Gene3D - 1 108 - -
Adu02g00956 294 ProSitePatterns Ribosomal protein S2 signature 2. 8 32 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00956 294 Pfam Ribosomal protein S2 5 71 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00956 294 PANTHER 40S RIBOSOMAL PROTEIN SA 1 181 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00956 294 SUPERFAMILY Ribosomal protein S2 2 89 IPR023591 -
Adu02g00956 294 PRINTS Ribosomal protein S2 signature 8 25 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00956 294 PRINTS Ribosomal protein S2 signature 25 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00956 294 PRINTS Ribosomal protein S2 signature 46 60 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00956 294 PANTHER 40S RIBOSOMAL PROTEIN SA 1 181 - -
Adu02g00956 294 CDD RPS2 2 73 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00956 Adu-Chr2 16251711 16253576 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00956 1 181 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 62.983 5.16e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00956 K02998 - gmx:100786575 250.751