Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00954 ATGTCTCCTGAGCCTGAGGAAGGACAGATAGGAGGCAGTGTTCGAGTCATGTATGGGGACCAGCTTAATTTGACCAATGGTGATTTGCTAGATAGAACACCATCTGGAGCAGTCCACGTTATGACACCTAGCAATCAAGCAAACACTCCTCAATTATCTGAGCAGTTGAAATCTGATACAATGAATGATGATGCCATGATTGGACCTGATGATGCAGAACCTGTAGAAGCAGGTCAAGATGAGCAAAAAGCTGAAGACCCATTGAATAAATTTCTCCCTCCTCCACCAAAAGCAAAATGCTCAGAGGAACTGCAACAAATACTGGTTTTTCTATTTTTTAACTTCTATTTGTTTCTTGGTGCCTTAAATGAACAAACAGAGGCTGATATGAGGCGTGAAAGTGAAAGGAAAGAACATGAGAAGAAGAAAGCACAGAAGATGGAATTTATCGCTGGGGGAACACAACCGGGAATCGTAGCAGCAGGTGCTCCCAGAATCAGCTTGCCTGTTGCAGGTGGTTCTGCTGTGGCTGCAAGTGGTTTGGTGCCACCTATAGCTGACTCTATTAATCGGGATGGTAGACAGAACAAAAAATCAAAATGGGATAAGGTGGATGGTGATCGAAAAAATCCTCTGCCCTCTGTGGGGCAGGATTCTGTATCTACTGTTGGGGCTCATGCAGCAATTCTATCTGCTGTTAATGCTGGCAGTGGGTACATGCTATTTGTTGACGGTGTTTTTGTTGGGCAGGCAGCAAAAACGGCGAGAGGCAGAGCTGCTACTACAAATCTCTCAAGAGACCAACTCTCCTCCCCAACGATGGCCACTTCCGCCGCCACAACCGCTGCAGTGTCGCGCCAGCTCTCGCAAAAGGAGCAAGACATCCAAATGATGCTCGCAGCTGAGTTTCTTTGGGGTCCAGATACTCCTTGCTCTTCAATGGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATCGAGAACCCTCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTTACTGATCCAAGGACTGATCATCAGCCCATTAAGAAAGGTGCTCTTGGAAATATTCCGACAATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTGGCATTCTTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTATTTTGCTCTTTTAGATTTATTGTGTGTTTTCCAATGTTTGCATTGCAAATGTCTCATCTGGTGGATTTATTCTTCTATAGAGAACCTAAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCATCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTTCCAGCAGCTGATGGAGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACTAGTTCCTCAACAACCTATTACAGCTGCACCTACTAACTAG 1605 0.4586 MSPEPEEGQIGGSVRVMYGDQLNLTNGDLLDRTPSGAVHVMTPSNQANTPQLSEQLKSDTMNDDAMIGPDDAEPVEAGQDEQKAEDPLNKFLPPPPKAKCSEELQQILVFLFFNFYLFLGALNEQTEADMRRESERKEHEKKKAQKMEFIAGGTQPGIVAAGAPRISLPVAGGSAVAASGLVPPIADSINRDGRQNKKSKWDKVDGDRKNPLPSVGQDSVSTVGAHAAILSAVNAGSGYMLFVDGVFVGQAAKTARGRAATTNLSRDQLSSPTMATSAATTAAVSRQLSQKEQDIQMMLAAEFLWGPDTPCSSMGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKKGALGNIPTIAFCDTDSPMRYVDVGILANNKGKHSIGCLFCSFRFIVCFPMFALQMSHLVDLFFYREPKEAKQQEEEELPSAPEYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTELVPQQPITAAPTN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00954 534 MobiDBLite consensus disorder prediction 187 218 - -
Adu02g00954 534 PANTHER 40S RIBOSOMAL PROTEIN SA 241 533 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00954 534 MobiDBLite consensus disorder prediction 38 60 - -
Adu02g00954 534 MobiDBLite consensus disorder prediction 191 209 - -
Adu02g00954 534 MobiDBLite consensus disorder prediction 25 88 - -
Adu02g00954 534 Coils Coil 123 147 - -
Adu02g00954 534 CDD RPS2 315 448 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00954 534 Gene3D - 289 485 - -
Adu02g00954 534 Pfam Ribosomal protein S2 383 443 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00954 534 PANTHER 40S RIBOSOMAL PROTEIN SA 241 533 - -
Adu02g00954 534 SUPERFAMILY Ribosomal protein S2 291 449 IPR023591 -
Adu02g00954 534 PRINTS Ribosomal protein S2 signature 406 417 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00954 534 PRINTS Ribosomal protein S2 signature 389 406 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00954 534 PRINTS Ribosomal protein S2 signature 427 441 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00954 534 PRINTS Ribosomal protein S2 signature 364 381 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00954 534 PRINTS Ribosomal protein S2 signature 315 324 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00954 Adu-Chr2 16204469 16210466 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00954 274 532 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 60.806 1.40e-103 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00954 K02998 - gmx:100786575 352.829