Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00948 ATGCCGCCACCACCATCAATTCCTTCAAGTTCAAAGGGGAGGAAGTTCAGTCATGAAGATTGGCAAGCTGATTTTGCTGCACATTTGGAGTTTCCATTATCTCCAAATCTCTCAAGAGCACAAATCTGCACTGCAACCATGGTCACTTCTGCCGCCGCCACAACTGCCACAGCGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGTGACTTCCAGATGGAACGCTACATCTTCAAACGCCGAAATGATGATATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGAATTATTGTTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGCTGTCCTTAAGTTTGAACAATACACTAGTGCGAATGCAATTGTTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACAAGCCTCGTCTACTCATTCTGATTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAAGGGTACTATTTGTCTGGGGCTTAACTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGTATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGGGAATGGGAGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAGCAACCCATTGCAGCTGCTCATGCTAACTGGGCCCCAGACGCCGCTACAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGCTGGGACTAG 1062 0.4859 MPPPPSIPSSSKGRKFSHEDWQADFAAHLEFPLSPNLSRAQICTATMVTSAAATTATAPRQLSQKEQDIQMLAAEVHLGTKNCDFQMERYIFKRRNDDIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFEQYTSANAIVGRHTPGTFTNQMQTSYNKPRLLILIDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMKGTICLGLNWDVMVDLFFYREPEEAKQQEEEVLPAAPEYAIQDFGAAGIAGFPAADGEWEAVTAEQSWTEPVPQQPIAAAHANWAPDAATGDWEPVPAPQASVPAPGGVAPTGWD 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00948 353 ProSitePatterns Ribosomal protein S2 signature 2. 172 196 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 MobiDBLite consensus disorder prediction 325 353 - -
Adu02g00948 353 Gene3D - 69 271 - -
Adu02g00948 353 PANTHER 40S RIBOSOMAL PROTEIN SA 54 345 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00948 353 Pfam Ribosomal protein S2 166 235 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 PRINTS Ribosomal protein S2 signature 98 107 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 PRINTS Ribosomal protein S2 signature 172 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 PRINTS Ribosomal protein S2 signature 189 200 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 PRINTS Ribosomal protein S2 signature 210 224 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 PRINTS Ribosomal protein S2 signature 68 86 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 PRINTS Ribosomal protein S2 signature 147 164 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 PANTHER 40S RIBOSOMAL PROTEIN SA 54 345 - -
Adu02g00948 353 CDD RPS2 71 237 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00948 353 TIGRFAM uS2_euk_arch: ribosomal protein uS2 69 259 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00948 353 Hamap 40S ribosomal protein SA [rps-0]. 56 300 IPR027498 GO:0003735|GO:0006412|GO:0015935
Adu02g00948 353 SUPERFAMILY Ribosomal protein S2 70 253 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00948 Adu-Chr2 16169725 16172968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00948 51 345 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 68.243 3.06e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00948 K02998 - gmx:100786575 444.891