Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00947 ATGGCCACTTCCACCGCCACAACCGCTGCAGTGTCGCGCCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGCTGAGGTTCATCTTGGAACCAAAAACTGCGACTTCCAGATAGAACGCTACATTTTCAAGCACCGCAATGATGGTATCTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATCGAGAACCCTCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGTAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTTACTGATCCAAGGACTGATCATCAGCCCATTAAGAAAGGTGCTCTTGGAAATATTCCGACGATTGCCTTCTACGACACTGATTCTCCGATGCGCTATGTTGATGTTGGCATTCTTGCCAATAACAAGGGGAAGCACAATATTGGTTGTCTGTTTTGCTCTTTTAGATTTATTGTGTGTTTTCCAATGTTTGCATTGCAAATGTCTCATCTGGTGGATTTATTTTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCATCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGGCTGAACCAGTTCCTCAACAACCCATTGTAGCTGCACCTGCTAACTGGGCCCCAGATGCTGGTAAGAATAATTGTTTCTACTCTGGATCTATTGTTGTTGTGTTGAATCGTTCTCCCTCAATATGCAAGAAAATCGGTACGCCTTACCATAGTTCTGTCAGAAACTGTGATGGCAATATATTTGACCTAAGTTCTTTTGTATCCGCAGCTGCAGGTGACTGGGAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCACCCGGAGGTGTTGTCCTCACTGGCTGGGAATAA 1059 0.4712 MATSTATTAAVSRQLSQKEQDIQMMLAAEVHLGTKNCDFQIERYIFKHRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANVIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKKGALGNIPTIAFYDTDSPMRYVDVGILANNKGKHNIGCLFCSFRFIVCFPMFALQMSHLVDLFFYREPEEAKQQEEEELPSAPEYAIQDFGAAGIAGFPAADGEWGAVTAEQSWAEPVPQQPIVAAPANWAPDAGKNNCFYSGSIVVVLNRSPSICKKIGTPYHSSVRNCDGNIFDLSSFVSAAAGDWEPVPAPQASVPAPGGVVLTGWE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00947 352 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 PANTHER 40S RIBOSOMAL PROTEIN SA 10 270 - -
Adu02g00947 352 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 182 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00947 352 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 SUPERFAMILY Ribosomal protein S2 17 186 IPR023591 -
Adu02g00947 352 PANTHER 40S RIBOSOMAL PROTEIN SA 10 270 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00947 352 Hamap 40S ribosomal protein SA [rps-0]. 9 250 IPR027498 GO:0003735|GO:0006412|GO:0015935
Adu02g00947 352 CDD RPS2 25 185 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00947 352 Gene3D - 21 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00947 Adu-Chr2 16155493 16157707 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00947 1 270 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 65.328 1.10e-122 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00947 K02998 - gmx:100786575 401.364