Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00942 ATGGCCACTTCCGCCGCTGCGCCGCGCCAGCTCTCTCAGAAGGAGCAAGACATCCAGATGATGCTTGCGGCTGAGGTGCATTTGGGAACCAAAAACTGCGACTTCCAGATGGAACGCTATGTCTTCAAACGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTCGCCATCGAGAATCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAATTTGCCCAATACACCGGTGCAAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTTCTTATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTACAGATGAGGGGTACTATTCATCCGGGGCTTAAGTGGGATGTGATCTTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCTAGAATATGCCATTCAAGATTTTGGTGCTGCTGCTGCTCCTGCTAACTGGGCCCCAGACGCCGCTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGCTGGGACTAG 819 0.4969 MATSAAAPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMRGTIHPGLKWDVILDLFFYREPEEAKQQEEEELPAALEYAIQDFGAAAAPANWAPDAAAGDWEPVPAPQASVPAPGGVAPTGWD 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00942 272 Pfam Ribosomal protein S2 21 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 PANTHER 40S RIBOSOMAL PROTEIN SA 8 233 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00942 272 SUPERFAMILY Ribosomal protein S2 13 203 IPR023591 -
Adu02g00942 272 Gene3D - 17 222 - -
Adu02g00942 272 ProSitePatterns Ribosomal protein S2 signature 2. 122 146 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 PANTHER 40S RIBOSOMAL PROTEIN SA 8 233 - -
Adu02g00942 272 MobiDBLite consensus disorder prediction 243 272 - -
Adu02g00942 272 CDD RPS2 21 187 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 Hamap 40S ribosomal protein SA [rps-0]. 5 253 IPR027498 GO:0003735|GO:0006412|GO:0015935
Adu02g00942 272 PRINTS Ribosomal protein S2 signature 160 174 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 PRINTS Ribosomal protein S2 signature 18 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 PRINTS Ribosomal protein S2 signature 48 57 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 PRINTS Ribosomal protein S2 signature 139 150 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 PRINTS Ribosomal protein S2 signature 97 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 PRINTS Ribosomal protein S2 signature 122 139 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00942 272 TIGRFAM uS2_euk_arch: ribosomal protein uS2 14 209 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00942 272 ProSitePatterns Ribosomal protein S2 signature 1. 18 29 IPR018130 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00942 Adu-Chr2 16061049 16130399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00942 5 272 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 72.794 2.59e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00942 K02998 - gmx:100786575 417.157