Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00928 ATGGCCACTTCCGCCGCTGCGCCGCGCCAGCTCTCTCAGAAGGAGCAAGACATCCAGATGATGCTTGCGGCTGAGGTGCATTTGGGAACCAAAAACTGCGACTTCCAGATGGAACGCTATGTCTTCAAACGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTCGCCATCGAGAATCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAATTTGCCCAATACACCGGTGCAAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTTCTTATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGCTGCGCCTGCTGATTGGGCCCCAGATACTTCTGCAGCTGCAGGTGATTGGGAACCGGTTCCAGCTCCTCAGCCTTCCGTTCCGGCACCCGGAGCTGTTGCTCCCACTGGTTGGGAATAG 537 0.5196 MATSAAAPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEAAPADWAPDTSAAAGDWEPVPAPQPSVPAPGAVAPTGWE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00928 178 MobiDBLite consensus disorder prediction 140 178 - -
Adu02g00928 178 Pfam Ribosomal protein S2 21 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00928 178 PANTHER 40S RIBOSOMAL PROTEIN SA 8 141 - -
Adu02g00928 178 PANTHER 40S RIBOSOMAL PROTEIN SA 8 141 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00928 178 SUPERFAMILY Ribosomal protein S2 13 141 IPR023591 -
Adu02g00928 178 Gene3D - 17 145 - -
Adu02g00928 178 CDD RPS2 21 141 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00928 178 ProSitePatterns Ribosomal protein S2 signature 1. 18 29 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00928 178 PRINTS Ribosomal protein S2 signature 18 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00928 178 PRINTS Ribosomal protein S2 signature 122 139 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00928 178 PRINTS Ribosomal protein S2 signature 48 57 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00928 178 PRINTS Ribosomal protein S2 signature 97 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00928 Adu-Chr2 15881692 15883682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00928 1 141 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 87.324 8.20e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00928 K02998 - jre:109004976 271.166