Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00917 ATGAGCAAGGCCTTCGTAGAGAAGTGGTACTACAAGCAAAAGGGTGTGGTGAGAAAGGTGATTGACAAATATGTTGGGGAAACTGAGATGCTTGAAAGCAAGCATGTGCTAAGAGTCGATCAGGAAGAGCTTGAAACTGTGATTCCACAAGTTGGGGGCCGTGTAAAAATTGTCAATGGTGCATATCGTGGATCAACTGCGAAACTTTTGGGAGTGGATACGGATCATTTTTGTGCAAAGCACAATGAGTTTGAATATGGGAACGTGCTGGATGCTGGATGCTGCGAATTTCATCATCGATGGTCTGTTCTTGTGGTTGCTCACAATGCCGTTAATCAGGCTCTTGTTGCTACAGCAATTGGTTTAGGGGTGGAGTATTTTAGATGTTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTGGATTTCATTCCCAGGCCTGAGGGCGGATCTCCGGACATTTGCCTCGATCGCTTAAATCAGACCCCTGGTTCACCAGTGGCTGGTGGAAAATCTGGAGGAAGAGATACAAATAAGTGGATCATACTTGTTTGTAATGGATCTACGCAGGGAAATACGGAGAATGGTTTTCCTTTTGCTGGTGATCATCCAATGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAGGTGAGTTCCATAATTAGCAGTCCTAACAAGGGTTGTTTTGAGACTGCCATGACCATCTCCAAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCACGCTATGTTGAATTGAAGCAAATCGGTAGCCTAGATGATCTATCCAACTTCCCCCCAATTCAGCCTGGATGGTTAAATAGGATTGATGATGGGTTGAGAACAACATTATGGGATCAATCTGAAAAGGCATGGCAATCCTTGTTGGATGAAATATCCAATGAATCGAGCAAAGGAGTCTTGGTCGCGGTTGCTCATCCAGCAATCCACATAGCACTAATGGGGCACTGCCTTAACATGACCAAGGAATGGTTAGGATCATTTCATCTTGACGAAGGGAGTGTTAGTGTCCTTGACTTTCCTGATGGCCCTAAAGGAAGAGGTGTCATAAGGCCTAATGCAAACAAGAACCAGCTCTCAGTTCCCAAACATGCCAAAAGATCGCTTTTGGAGAAAACCTGTGATCTTATCAAGAATTTTCCGGAGTACCTTGTTGTTGTAAGTGTTGCAAGAAAAACTGATGGTCGTCATTGGGCAGATTTGCTTTGA 1260 0.4437 MSKAFVEKWYYKQKGVVRKVIDKYVGETEMLESKHVLRVDQEELETVIPQVGGRVKIVNGAYRGSTAKLLGVDTDHFCAKHNEFEYGNVLDAGCCEFHHRWSVLVVAHNAVNQALVATAIGLGVEYFRCLLQSNCGVSVLDFIPRPEGGSPDICLDRLNQTPGSPVAGGKSGGRDTNKWIILVCNGSTQGNTENGFPFAGDHPMNMLGVIQSQKSAELLLDLKVSSIISSPNKGCFETAMTISKVQEAADCLGADCVPRYVELKQIGSLDDLSNFPPIQPGWLNRIDDGLRTTLWDQSEKAWQSLLDEISNESSKGVLVAVAHPAIHIALMGHCLNMTKEWLGSFHLDEGSVSVLDFPDGPKGRGVIRPNANKNQLSVPKHAKRSLLEKTCDLIKNFPEYLVVVSVARKTDGRHWADLL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00917 419 SMART kow_9 48 75 IPR005824 -
Adu02g00917 419 CDD HP_PGM_like 180 368 IPR013078 -
Adu02g00917 419 Pfam Histidine phosphatase superfamily (branch 1) 98 143 IPR013078 -
Adu02g00917 419 Pfam Histidine phosphatase superfamily (branch 1) 180 360 IPR013078 -
Adu02g00917 419 SUPERFAMILY Phosphoglycerate mutase-like 178 360 IPR029033 -
Adu02g00917 419 Pfam RIC1 380 419 IPR009771 -
Adu02g00917 419 Pfam KN17 SH3-like C-terminal domain 1 40 IPR041330 -
Adu02g00917 419 Gene3D - 178 363 IPR029033 -
Adu02g00917 419 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 13 81 IPR037321 -
Adu02g00917 419 PANTHER BNAA05G13760D PROTEIN 13 81 - -
Adu02g00917 419 Gene3D - 1 48 - -
Adu02g00917 419 SUPERFAMILY Phosphoglycerate mutase-like 98 145 IPR029033 -
Adu02g00917 419 Gene3D - 49 82 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00917 Adu-Chr2 15795225 15798244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00917 1 80 C2H2 Transcription Factor Family AT1G55460 80.000 9.24e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00917 K22200 - gmx:100798495 452.981